Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Trav13d-3J3QMG8 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav13d-3J3QMG8 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav13d-3J3QMG8 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav13d-3J3QMG8 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav13d-3J3QMG8 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.49□□□□□ -0.09
Trav13d-3J3QMG8 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav13d-3J3QMG8 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav13d-3J3QMG8 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav13d-3J3QMG8 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav13d-3J3QMG8 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav13d-3J3QMG8 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13d-3J3QMG8 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13d-3J3QMG8 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trav13d-3J3QMG8 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.48□□□□□ -0.09
Trav13d-3J3QMG8 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.48□□□□□ -0.09
Trav13d-3J3QMG8 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13d-3J3QMG8 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trav13d-3J3QMG8 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trav13d-3J3QMG8 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.48□□□□□ -0.09
Trav13d-3J3QMG8 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13d-3J3QMG8 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13d-3J3QMG8 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13d-3J3QMG8 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13d-3J3QMG8 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13d-3J3QMG8 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trav13d-3J3QMG8 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Trav13d-3J3QMG8 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trav13d-3J3QMG8 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC14.48□□□□□ -0.09
Trav13d-3J3QMG8 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.48□□□□□ -0.09
Trav13d-3J3QMG8 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.48□□□□□ -0.09
Trav13d-3J3QMG8 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13d-3J3QMG8 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13d-3J3QMG8 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC14.48□□□□□ -0.09
Trav13d-3J3QMG8 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Trav13d-3J3QMG8 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC14.48□□□□□ -0.09
Trav13d-3J3QMG8 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.48□□□□□ -0.09
Trav13d-3J3QMG8 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13d-3J3QMG8 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13d-3J3QMG8 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13d-3J3QMG8 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13d-3J3QMG8 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13d-3J3QMG8 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13d-3J3QMG8 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13d-3J3QMG8 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13d-3J3QMG8 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trav13d-3J3QMG8 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13d-3J3QMG8 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13d-3J3QMG8 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.47□□□□□ -0.09
Trav13d-3J3QMG8 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13d-3J3QMG8 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13d-3J3QMG8 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13d-3J3QMG8 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13d-3J3QMG8 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13d-3J3QMG8 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13d-3J3QMG8 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13d-3J3QMG8 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13d-3J3QMG8 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13d-3J3QMG8 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC14.47□□□□□ -0.09
Trav13d-3J3QMG8 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13d-3J3QMG8 Gm37722-201ENSMUST00000193757 208 ntBASIC14.47□□□□□ -0.09
Trav13d-3J3QMG8 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13d-3J3QMG8 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13d-3J3QMG8 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13d-3J3QMG8 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13d-3J3QMG8 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13d-3J3QMG8 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13d-3J3QMG8 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13d-3J3QMG8 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13d-3J3QMG8 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13d-3J3QMG8 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13d-3J3QMG8 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Trav13d-3J3QMG8 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13d-3J3QMG8 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.46□□□□□ -0.09
Trav13d-3J3QMG8 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC14.46□□□□□ -0.09
Trav13d-3J3QMG8 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13d-3J3QMG8 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13d-3J3QMG8 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13d-3J3QMG8 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.46□□□□□ -0.09
Trav13d-3J3QMG8 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13d-3J3QMG8 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13d-3J3QMG8 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Trav13d-3J3QMG8 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13d-3J3QMG8 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13d-3J3QMG8 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC14.46□□□□□ -0.09
Trav13d-3J3QMG8 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13d-3J3QMG8 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13d-3J3QMG8 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13d-3J3QMG8 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13d-3J3QMG8 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13d-3J3QMG8 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13d-3J3QMG8 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13d-3J3QMG8 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13d-3J3QMG8 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13d-3J3QMG8 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav13d-3J3QMG8 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.46□□□□□ -0.1
Trav13d-3J3QMG8 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav13d-3J3QMG8 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Trav13d-3J3QMG8 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav13d-3J3QMG8 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms