Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Gm3139J3QK78 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm3139J3QK78 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm3139J3QK78 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm3139J3QK78 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Gm3139J3QK78 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Gm3139J3QK78 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm3139J3QK78 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Gm3139J3QK78 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm3139J3QK78 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm3139J3QK78 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm3139J3QK78 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.39■□□□□ 0.21
Gm3139J3QK78 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Gm3139J3QK78 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.39■□□□□ 0.21
Gm3139J3QK78 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm3139J3QK78 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.39■□□□□ 0.21
Gm3139J3QK78 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.39■□□□□ 0.21
Gm3139J3QK78 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Gm3139J3QK78 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm3139J3QK78 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.39■□□□□ 0.21
Gm3139J3QK78 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm3139J3QK78 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm3139J3QK78 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm3139J3QK78 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm3139J3QK78 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.39■□□□□ 0.21
Gm3139J3QK78 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm3139J3QK78 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Gm3139J3QK78 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.38■□□□□ 0.21
Gm3139J3QK78 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm3139J3QK78 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm3139J3QK78 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm3139J3QK78 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Gm3139J3QK78 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm3139J3QK78 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.38■□□□□ 0.21
Gm3139J3QK78 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.38■□□□□ 0.21
Gm3139J3QK78 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Gm3139J3QK78 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm3139J3QK78 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.38■□□□□ 0.21
Gm3139J3QK78 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Gm3139J3QK78 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm3139J3QK78 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm3139J3QK78 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm3139J3QK78 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.38■□□□□ 0.21
Gm3139J3QK78 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm3139J3QK78 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm3139J3QK78 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm3139J3QK78 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Gm3139J3QK78 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Gm3139J3QK78 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Gm3139J3QK78 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.37■□□□□ 0.21
Gm3139J3QK78 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm3139J3QK78 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm3139J3QK78 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Gm3139J3QK78 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.37■□□□□ 0.21
Gm3139J3QK78 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm3139J3QK78 Gm36967-201ENSMUST00000193814 266 ntBASIC16.37■□□□□ 0.21
Gm3139J3QK78 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
Gm3139J3QK78 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm3139J3QK78 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Gm3139J3QK78 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm3139J3QK78 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm3139J3QK78 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm3139J3QK78 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm3139J3QK78 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm3139J3QK78 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm3139J3QK78 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.36■□□□□ 0.21
Gm3139J3QK78 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.36■□□□□ 0.21
Gm3139J3QK78 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm3139J3QK78 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm3139J3QK78 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm3139J3QK78 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Gm3139J3QK78 Gm13312-201ENSMUST00000119631 718 ntBASIC16.36■□□□□ 0.21
Gm3139J3QK78 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Gm3139J3QK78 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Gm3139J3QK78 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.36■□□□□ 0.21
Gm3139J3QK78 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Gm3139J3QK78 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.36■□□□□ 0.21
Gm3139J3QK78 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.36■□□□□ 0.21
Gm3139J3QK78 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm3139J3QK78 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Gm3139J3QK78 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.36■□□□□ 0.21
Gm3139J3QK78 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Gm3139J3QK78 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Gm3139J3QK78 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm3139J3QK78 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm3139J3QK78 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm3139J3QK78 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Gm3139J3QK78 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.36■□□□□ 0.21
Gm3139J3QK78 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Gm3139J3QK78 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Gm3139J3QK78 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Gm3139J3QK78 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.35■□□□□ 0.21
Gm3139J3QK78 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Gm3139J3QK78 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Gm3139J3QK78 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm3139J3QK78 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm3139J3QK78 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm3139J3QK78 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Gm3139J3QK78 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm3139J3QK78 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms