Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim55G3X8Y1 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Trim55G3X8Y1 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim55G3X8Y1 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim55G3X8Y1 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim55G3X8Y1 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim55G3X8Y1 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Trim55G3X8Y1 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim55G3X8Y1 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim55G3X8Y1 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC16.99■□□□□ 0.31
Trim55G3X8Y1 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trim55G3X8Y1 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim55G3X8Y1 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim55G3X8Y1 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trim55G3X8Y1 Asic1-205ENSMUST00000228185 1818 ntBASIC16.98■□□□□ 0.31
Trim55G3X8Y1 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim55G3X8Y1 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim55G3X8Y1 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.98■□□□□ 0.31
Trim55G3X8Y1 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim55G3X8Y1 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim55G3X8Y1 Prob1-201ENSMUST00000097619 3021 ntBASIC16.98■□□□□ 0.31
Trim55G3X8Y1 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim55G3X8Y1 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.98■□□□□ 0.31
Trim55G3X8Y1 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Trim55G3X8Y1 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trim55G3X8Y1 Gm26833-201ENSMUST00000180899 440 ntBASIC16.98■□□□□ 0.31
Trim55G3X8Y1 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim55G3X8Y1 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC16.98■□□□□ 0.31
Trim55G3X8Y1 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim55G3X8Y1 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim55G3X8Y1 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim55G3X8Y1 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trim55G3X8Y1 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Trim55G3X8Y1 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim55G3X8Y1 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC16.97■□□□□ 0.31
Trim55G3X8Y1 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim55G3X8Y1 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Trim55G3X8Y1 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim55G3X8Y1 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim55G3X8Y1 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
Trim55G3X8Y1 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trim55G3X8Y1 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trim55G3X8Y1 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim55G3X8Y1 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Trim55G3X8Y1 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC16.97■□□□□ 0.31
Trim55G3X8Y1 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trim55G3X8Y1 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.97■□□□□ 0.31
Trim55G3X8Y1 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim55G3X8Y1 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.97■□□□□ 0.31
Trim55G3X8Y1 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trim55G3X8Y1 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim55G3X8Y1 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim55G3X8Y1 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim55G3X8Y1 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Trim55G3X8Y1 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim55G3X8Y1 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim55G3X8Y1 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim55G3X8Y1 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim55G3X8Y1 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim55G3X8Y1 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Trim55G3X8Y1 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim55G3X8Y1 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim55G3X8Y1 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trim55G3X8Y1 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Trim55G3X8Y1 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trim55G3X8Y1 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.96■□□□□ 0.31
Trim55G3X8Y1 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim55G3X8Y1 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim55G3X8Y1 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Trim55G3X8Y1 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Trim55G3X8Y1 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trim55G3X8Y1 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC16.96■□□□□ 0.31
Trim55G3X8Y1 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC16.96■□□□□ 0.31
Trim55G3X8Y1 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC16.96■□□□□ 0.31
Trim55G3X8Y1 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.96■□□□□ 0.31
Trim55G3X8Y1 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
Trim55G3X8Y1 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim55G3X8Y1 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Trim55G3X8Y1 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.95■□□□□ 0.3
Trim55G3X8Y1 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim55G3X8Y1 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim55G3X8Y1 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
Trim55G3X8Y1 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim55G3X8Y1 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
Trim55G3X8Y1 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim55G3X8Y1 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Trim55G3X8Y1 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Trim55G3X8Y1 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Trim55G3X8Y1 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim55G3X8Y1 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim55G3X8Y1 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim55G3X8Y1 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim55G3X8Y1 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim55G3X8Y1 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Trim55G3X8Y1 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim55G3X8Y1 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Trim55G3X8Y1 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim55G3X8Y1 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC16.94■□□□□ 0.3
Trim55G3X8Y1 Gm29340-201ENSMUST00000188763 3854 ntBASIC16.94■□□□□ 0.3
Trim55G3X8Y1 Gm10584-201ENSMUST00000207036 2628 ntBASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms