Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf4lE9Q2N0 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf4lE9Q2N0 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf4lE9Q2N0 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Cpsf4lE9Q2N0 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf4lE9Q2N0 Gm15442-201ENSMUST00000117905 1527 ntBASIC13.95□□□□□ -0.18
Cpsf4lE9Q2N0 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Cpsf4lE9Q2N0 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Cpsf4lE9Q2N0 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Cpsf4lE9Q2N0 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpsf4lE9Q2N0 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Cpsf4lE9Q2N0 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpsf4lE9Q2N0 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpsf4lE9Q2N0 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpsf4lE9Q2N0 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpsf4lE9Q2N0 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpsf4lE9Q2N0 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpsf4lE9Q2N0 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cpsf4lE9Q2N0 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpsf4lE9Q2N0 AC159205.3-201ENSMUST00000224614 874 ntBASIC13.94□□□□□ -0.18
Cpsf4lE9Q2N0 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC13.94□□□□□ -0.18
Cpsf4lE9Q2N0 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Cpsf4lE9Q2N0 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpsf4lE9Q2N0 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpsf4lE9Q2N0 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cpsf4lE9Q2N0 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cpsf4lE9Q2N0 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpsf4lE9Q2N0 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Cpsf4lE9Q2N0 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cpsf4lE9Q2N0 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Cpsf4lE9Q2N0 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cpsf4lE9Q2N0 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC13.94□□□□□ -0.18
Cpsf4lE9Q2N0 Zkscan4-202ENSMUST00000225845 1506 ntBASIC13.94□□□□□ -0.18
Cpsf4lE9Q2N0 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpsf4lE9Q2N0 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpsf4lE9Q2N0 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpsf4lE9Q2N0 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpsf4lE9Q2N0 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpsf4lE9Q2N0 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cpsf4lE9Q2N0 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cpsf4lE9Q2N0 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cpsf4lE9Q2N0 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Cpsf4lE9Q2N0 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cpsf4lE9Q2N0 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cpsf4lE9Q2N0 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cpsf4lE9Q2N0 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cpsf4lE9Q2N0 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cpsf4lE9Q2N0 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Cpsf4lE9Q2N0 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Cpsf4lE9Q2N0 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cpsf4lE9Q2N0 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cpsf4lE9Q2N0 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cpsf4lE9Q2N0 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Cpsf4lE9Q2N0 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC13.93□□□□□ -0.18
Cpsf4lE9Q2N0 Gm25016-201ENSMUST00000158399 131 ntBASIC13.93□□□□□ -0.18
Cpsf4lE9Q2N0 Gm6623-201ENSMUST00000173570 544 ntBASIC13.93□□□□□ -0.18
Cpsf4lE9Q2N0 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cpsf4lE9Q2N0 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cpsf4lE9Q2N0 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cpsf4lE9Q2N0 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cpsf4lE9Q2N0 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cpsf4lE9Q2N0 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cpsf4lE9Q2N0 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cpsf4lE9Q2N0 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cpsf4lE9Q2N0 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cpsf4lE9Q2N0 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cpsf4lE9Q2N0 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13.93□□□□□ -0.18
Cpsf4lE9Q2N0 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Cpsf4lE9Q2N0 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cpsf4lE9Q2N0 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cpsf4lE9Q2N0 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cpsf4lE9Q2N0 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cpsf4lE9Q2N0 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cpsf4lE9Q2N0 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cpsf4lE9Q2N0 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cpsf4lE9Q2N0 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Cpsf4lE9Q2N0 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cpsf4lE9Q2N0 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cpsf4lE9Q2N0 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cpsf4lE9Q2N0 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cpsf4lE9Q2N0 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cpsf4lE9Q2N0 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Cpsf4lE9Q2N0 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Cpsf4lE9Q2N0 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cpsf4lE9Q2N0 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cpsf4lE9Q2N0 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Cpsf4lE9Q2N0 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Cpsf4lE9Q2N0 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cpsf4lE9Q2N0 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cpsf4lE9Q2N0 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Cpsf4lE9Q2N0 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cpsf4lE9Q2N0 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cpsf4lE9Q2N0 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cpsf4lE9Q2N0 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cpsf4lE9Q2N0 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Cpsf4lE9Q2N0 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cpsf4lE9Q2N0 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Cpsf4lE9Q2N0 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cpsf4lE9Q2N0 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC13.92□□□□□ -0.18
Cpsf4lE9Q2N0 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms