Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh17E9PXF0 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Pcdh17E9PXF0 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh17E9PXF0 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.3■□□□□ 0.04
Pcdh17E9PXF0 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh17E9PXF0 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Pcdh17E9PXF0 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh17E9PXF0 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh17E9PXF0 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh17E9PXF0 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh17E9PXF0 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh17E9PXF0 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh17E9PXF0 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh17E9PXF0 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh17E9PXF0 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.29■□□□□ 0.04
Pcdh17E9PXF0 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Pcdh17E9PXF0 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh17E9PXF0 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh17E9PXF0 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh17E9PXF0 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh17E9PXF0 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC15.29■□□□□ 0.04
Pcdh17E9PXF0 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC15.29■□□□□ 0.04
Pcdh17E9PXF0 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC15.29■□□□□ 0.04
Pcdh17E9PXF0 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh17E9PXF0 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Pcdh17E9PXF0 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh17E9PXF0 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh17E9PXF0 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.29■□□□□ 0.04
Pcdh17E9PXF0 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Pcdh17E9PXF0 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh17E9PXF0 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh17E9PXF0 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh17E9PXF0 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh17E9PXF0 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Pcdh17E9PXF0 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh17E9PXF0 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh17E9PXF0 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh17E9PXF0 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh17E9PXF0 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC15.28■□□□□ 0.04
Pcdh17E9PXF0 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.28■□□□□ 0.04
Pcdh17E9PXF0 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh17E9PXF0 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh17E9PXF0 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh17E9PXF0 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh17E9PXF0 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh17E9PXF0 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh17E9PXF0 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Pcdh17E9PXF0 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh17E9PXF0 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh17E9PXF0 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.28■□□□□ 0.04
Pcdh17E9PXF0 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh17E9PXF0 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh17E9PXF0 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh17E9PXF0 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Pcdh17E9PXF0 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh17E9PXF0 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh17E9PXF0 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Pcdh17E9PXF0 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh17E9PXF0 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh17E9PXF0 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh17E9PXF0 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh17E9PXF0 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh17E9PXF0 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh17E9PXF0 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh17E9PXF0 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh17E9PXF0 Gm12895-201ENSMUST00000122214 226 ntBASIC15.27■□□□□ 0.04
Pcdh17E9PXF0 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC15.27■□□□□ 0.04
Pcdh17E9PXF0 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
Pcdh17E9PXF0 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.27■□□□□ 0.04
Pcdh17E9PXF0 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.27■□□□□ 0.04
Pcdh17E9PXF0 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh17E9PXF0 Birc2-201ENSMUST00000054878 378 ntBASIC15.27■□□□□ 0.04
Pcdh17E9PXF0 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Pcdh17E9PXF0 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh17E9PXF0 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh17E9PXF0 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.27■□□□□ 0.04
Pcdh17E9PXF0 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdh17E9PXF0 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdh17E9PXF0 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Pcdh17E9PXF0 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdh17E9PXF0 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.27■□□□□ 0.03
Pcdh17E9PXF0 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh17E9PXF0 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh17E9PXF0 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh17E9PXF0 Haglr-201ENSMUST00000100000 2085 ntBASIC15.26■□□□□ 0.03
Pcdh17E9PXF0 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh17E9PXF0 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh17E9PXF0 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh17E9PXF0 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh17E9PXF0 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh17E9PXF0 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh17E9PXF0 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh17E9PXF0 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh17E9PXF0 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Pcdh17E9PXF0 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.26■□□□□ 0.03
Pcdh17E9PXF0 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
Pcdh17E9PXF0 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Pcdh17E9PXF0 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Pcdh17E9PXF0 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Pcdh17E9PXF0 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms