Protein–RNA interactions for Protein: D3Z3K2

Ccnb1ip1, E3 ubiquitin-protein ligase CCNB1IP1, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccnb1ip1D3Z3K2 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Ccnb1ip1D3Z3K2 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.96□□□□□ -0.01
Ccnb1ip1D3Z3K2 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC14.96□□□□□ -0.01
Ccnb1ip1D3Z3K2 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccnb1ip1D3Z3K2 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccnb1ip1D3Z3K2 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccnb1ip1D3Z3K2 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccnb1ip1D3Z3K2 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccnb1ip1D3Z3K2 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccnb1ip1D3Z3K2 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccnb1ip1D3Z3K2 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.96□□□□□ -0.01
Ccnb1ip1D3Z3K2 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ccnb1ip1D3Z3K2 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Ccnb1ip1D3Z3K2 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccnb1ip1D3Z3K2 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Ccnb1ip1D3Z3K2 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC14.96□□□□□ -0.01
Ccnb1ip1D3Z3K2 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Ccnb1ip1D3Z3K2 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ccnb1ip1D3Z3K2 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccnb1ip1D3Z3K2 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccnb1ip1D3Z3K2 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Ccnb1ip1D3Z3K2 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ccnb1ip1D3Z3K2 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ccnb1ip1D3Z3K2 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ccnb1ip1D3Z3K2 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ccnb1ip1D3Z3K2 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ccnb1ip1D3Z3K2 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccnb1ip1D3Z3K2 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccnb1ip1D3Z3K2 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccnb1ip1D3Z3K2 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.95□□□□□ -0.02
Ccnb1ip1D3Z3K2 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ccnb1ip1D3Z3K2 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccnb1ip1D3Z3K2 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccnb1ip1D3Z3K2 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.95□□□□□ -0.02
Ccnb1ip1D3Z3K2 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ccnb1ip1D3Z3K2 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccnb1ip1D3Z3K2 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccnb1ip1D3Z3K2 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ccnb1ip1D3Z3K2 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ccnb1ip1D3Z3K2 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccnb1ip1D3Z3K2 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Ccnb1ip1D3Z3K2 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC14.95□□□□□ -0.02
Ccnb1ip1D3Z3K2 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ccnb1ip1D3Z3K2 AC140264.2-202ENSMUST00000218746 817 ntBASIC14.95□□□□□ -0.02
Ccnb1ip1D3Z3K2 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccnb1ip1D3Z3K2 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Ccnb1ip1D3Z3K2 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Ccnb1ip1D3Z3K2 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccnb1ip1D3Z3K2 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccnb1ip1D3Z3K2 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ccnb1ip1D3Z3K2 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccnb1ip1D3Z3K2 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccnb1ip1D3Z3K2 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccnb1ip1D3Z3K2 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccnb1ip1D3Z3K2 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccnb1ip1D3Z3K2 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccnb1ip1D3Z3K2 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Ccnb1ip1D3Z3K2 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccnb1ip1D3Z3K2 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccnb1ip1D3Z3K2 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccnb1ip1D3Z3K2 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
Ccnb1ip1D3Z3K2 Reep4-203ENSMUST00000226563 1444 ntBASIC14.94□□□□□ -0.02
Ccnb1ip1D3Z3K2 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccnb1ip1D3Z3K2 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccnb1ip1D3Z3K2 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccnb1ip1D3Z3K2 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccnb1ip1D3Z3K2 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccnb1ip1D3Z3K2 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.94□□□□□ -0.02
Ccnb1ip1D3Z3K2 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccnb1ip1D3Z3K2 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccnb1ip1D3Z3K2 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccnb1ip1D3Z3K2 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ccnb1ip1D3Z3K2 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccnb1ip1D3Z3K2 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC14.94□□□□□ -0.02
Ccnb1ip1D3Z3K2 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccnb1ip1D3Z3K2 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.94□□□□□ -0.02
Ccnb1ip1D3Z3K2 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Ccnb1ip1D3Z3K2 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Ccnb1ip1D3Z3K2 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccnb1ip1D3Z3K2 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccnb1ip1D3Z3K2 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ccnb1ip1D3Z3K2 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ccnb1ip1D3Z3K2 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccnb1ip1D3Z3K2 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ccnb1ip1D3Z3K2 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Ccnb1ip1D3Z3K2 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccnb1ip1D3Z3K2 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccnb1ip1D3Z3K2 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccnb1ip1D3Z3K2 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccnb1ip1D3Z3K2 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccnb1ip1D3Z3K2 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccnb1ip1D3Z3K2 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccnb1ip1D3Z3K2 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccnb1ip1D3Z3K2 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ccnb1ip1D3Z3K2 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccnb1ip1D3Z3K2 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccnb1ip1D3Z3K2 Gm9988-201ENSMUST00000069786 435 ntBASIC14.93□□□□□ -0.02
Ccnb1ip1D3Z3K2 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccnb1ip1D3Z3K2 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccnb1ip1D3Z3K2 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms