Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm12887B1AVM1 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Gm12887B1AVM1 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm12887B1AVM1 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC13.39□□□□□ -0.27
Gm12887B1AVM1 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Gm12887B1AVM1 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm12887B1AVM1 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm12887B1AVM1 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm12887B1AVM1 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm12887B1AVM1 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm12887B1AVM1 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm12887B1AVM1 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm12887B1AVM1 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm12887B1AVM1 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm12887B1AVM1 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm12887B1AVM1 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm12887B1AVM1 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm12887B1AVM1 Gm15375-201ENSMUST00000119510 849 ntBASIC13.38□□□□□ -0.27
Gm12887B1AVM1 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC13.38□□□□□ -0.27
Gm12887B1AVM1 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm12887B1AVM1 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm12887B1AVM1 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Gm12887B1AVM1 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm12887B1AVM1 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm12887B1AVM1 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Gm12887B1AVM1 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm12887B1AVM1 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Gm12887B1AVM1 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm12887B1AVM1 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm12887B1AVM1 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Gm12887B1AVM1 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm12887B1AVM1 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC13.37□□□□□ -0.27
Gm12887B1AVM1 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm12887B1AVM1 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Gm12887B1AVM1 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Gm12887B1AVM1 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm12887B1AVM1 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Gm12887B1AVM1 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm12887B1AVM1 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Gm12887B1AVM1 Gm5408-201ENSMUST00000197998 747 ntBASIC13.37□□□□□ -0.27
Gm12887B1AVM1 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm12887B1AVM1 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm12887B1AVM1 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Gm12887B1AVM1 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Gm12887B1AVM1 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm12887B1AVM1 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC13.37□□□□□ -0.27
Gm12887B1AVM1 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Gm12887B1AVM1 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm12887B1AVM1 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm12887B1AVM1 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Gm12887B1AVM1 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm12887B1AVM1 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm12887B1AVM1 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Gm12887B1AVM1 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm12887B1AVM1 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
Gm12887B1AVM1 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Gm12887B1AVM1 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Gm12887B1AVM1 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm12887B1AVM1 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC13.36□□□□□ -0.27
Gm12887B1AVM1 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm12887B1AVM1 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm12887B1AVM1 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm12887B1AVM1 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm12887B1AVM1 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Gm12887B1AVM1 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm12887B1AVM1 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Gm12887B1AVM1 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Gm12887B1AVM1 AV356131-201ENSMUST00000206201 750 ntBASIC13.36□□□□□ -0.27
Gm12887B1AVM1 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm12887B1AVM1 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm12887B1AVM1 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm12887B1AVM1 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm12887B1AVM1 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Gm12887B1AVM1 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm12887B1AVM1 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm12887B1AVM1 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm12887B1AVM1 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm12887B1AVM1 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Gm12887B1AVM1 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm12887B1AVM1 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Gm12887B1AVM1 Gm45560-201ENSMUST00000211492 1472 ntBASIC13.36□□□□□ -0.27
Gm12887B1AVM1 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm12887B1AVM1 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.35□□□□□ -0.27
Gm12887B1AVM1 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Gm12887B1AVM1 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm12887B1AVM1 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm12887B1AVM1 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Gm12887B1AVM1 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC13.35□□□□□ -0.27
Gm12887B1AVM1 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm12887B1AVM1 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm12887B1AVM1 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Gm12887B1AVM1 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Gm12887B1AVM1 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC13.35□□□□□ -0.27
Gm12887B1AVM1 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm12887B1AVM1 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm12887B1AVM1 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm12887B1AVM1 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm12887B1AVM1 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC13.35□□□□□ -0.27
Gm12887B1AVM1 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Gm12887B1AVM1 Gm26524-201ENSMUST00000192339 390 ntBASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 143 ms