Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.32□□□□□ -0.28
Chd6A3KFM7 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Chd6A3KFM7 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Chd6A3KFM7 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chd6A3KFM7 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chd6A3KFM7 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Chd6A3KFM7 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Chd6A3KFM7 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chd6A3KFM7 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chd6A3KFM7 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chd6A3KFM7 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chd6A3KFM7 Gm8825-201ENSMUST00000182565 998 ntBASIC13.32□□□□□ -0.28
Chd6A3KFM7 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC13.32□□□□□ -0.28
Chd6A3KFM7 Thap2-203ENSMUST00000218989 527 ntBASIC13.32□□□□□ -0.28
Chd6A3KFM7 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Chd6A3KFM7 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chd6A3KFM7 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Chd6A3KFM7 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chd6A3KFM7 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chd6A3KFM7 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chd6A3KFM7 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Chd6A3KFM7 Gm11478-201ENSMUST00000117851 599 ntBASIC13.31□□□□□ -0.28
Chd6A3KFM7 Gm13597-201ENSMUST00000121239 375 ntBASIC13.31□□□□□ -0.28
Chd6A3KFM7 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC13.31□□□□□ -0.28
Chd6A3KFM7 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Chd6A3KFM7 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC13.31□□□□□ -0.28
Chd6A3KFM7 Gm8655-201ENSMUST00000221159 852 ntBASIC13.31□□□□□ -0.28
Chd6A3KFM7 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Chd6A3KFM7 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chd6A3KFM7 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chd6A3KFM7 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chd6A3KFM7 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Chd6A3KFM7 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chd6A3KFM7 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Chd6A3KFM7 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chd6A3KFM7 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC13.31□□□□□ -0.28
Chd6A3KFM7 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chd6A3KFM7 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chd6A3KFM7 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chd6A3KFM7 Gm4459-201ENSMUST00000118750 468 ntBASIC13.31□□□□□ -0.28
Chd6A3KFM7 Gm13365-201ENSMUST00000121188 973 ntBASIC13.31□□□□□ -0.28
Chd6A3KFM7 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.31□□□□□ -0.28
Chd6A3KFM7 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC13.31□□□□□ -0.28
Chd6A3KFM7 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.31□□□□□ -0.28
Chd6A3KFM7 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.31□□□□□ -0.28
Chd6A3KFM7 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Chd6A3KFM7 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Chd6A3KFM7 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Chd6A3KFM7 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.3□□□□□ -0.28
Chd6A3KFM7 Rprl2-201ENSMUST00000157150 290 ntBASIC13.3□□□□□ -0.28
Chd6A3KFM7 Gm27646-201ENSMUST00000183989 110 ntBASIC13.3□□□□□ -0.28
Chd6A3KFM7 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.3□□□□□ -0.28
Chd6A3KFM7 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chd6A3KFM7 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chd6A3KFM7 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Chd6A3KFM7 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chd6A3KFM7 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chd6A3KFM7 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chd6A3KFM7 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chd6A3KFM7 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Chd6A3KFM7 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chd6A3KFM7 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chd6A3KFM7 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Chd6A3KFM7 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.3□□□□□ -0.28
Chd6A3KFM7 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC13.3□□□□□ -0.28
Chd6A3KFM7 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chd6A3KFM7 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chd6A3KFM7 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC13.3□□□□□ -0.28
Chd6A3KFM7 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chd6A3KFM7 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chd6A3KFM7 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Chd6A3KFM7 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Chd6A3KFM7 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chd6A3KFM7 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.3□□□□□ -0.28
Chd6A3KFM7 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chd6A3KFM7 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chd6A3KFM7 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chd6A3KFM7 Idnk-204ENSMUST00000226010 1898 ntBASIC13.29□□□□□ -0.28
Chd6A3KFM7 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Chd6A3KFM7 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Chd6A3KFM7 Gm8602-201ENSMUST00000184045 607 ntBASIC13.29□□□□□ -0.28
Chd6A3KFM7 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chd6A3KFM7 Gm7730-201ENSMUST00000212486 454 ntBASIC13.29□□□□□ -0.28
Chd6A3KFM7 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chd6A3KFM7 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chd6A3KFM7 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Chd6A3KFM7 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chd6A3KFM7 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Chd6A3KFM7 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC13.29□□□□□ -0.28
Chd6A3KFM7 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chd6A3KFM7 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chd6A3KFM7 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chd6A3KFM7 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.29□□□□□ -0.28
Chd6A3KFM7 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.29□□□□□ -0.28
Chd6A3KFM7 AY702102-202ENSMUST00000194651 1173 ntBASIC13.29□□□□□ -0.28
Chd6A3KFM7 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC13.29□□□□□ -0.28
Chd6A3KFM7 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chd6A3KFM7 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Chd6A3KFM7 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chd6A3KFM7 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms