Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a4A2AX52 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC13.84□□□□□ -0.19
Col6a4A2AX52 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a4A2AX52 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a4A2AX52 AC123834.2-201ENSMUST00000224038 2340 ntBASIC13.84□□□□□ -0.19
Col6a4A2AX52 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Col6a4A2AX52 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a4A2AX52 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a4A2AX52 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC13.84□□□□□ -0.19
Col6a4A2AX52 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a4A2AX52 Gm25911-201ENSMUST00000157621 56 ntBASIC13.84□□□□□ -0.19
Col6a4A2AX52 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC13.84□□□□□ -0.19
Col6a4A2AX52 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC13.84□□□□□ -0.19
Col6a4A2AX52 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC13.84□□□□□ -0.19
Col6a4A2AX52 Gm6089-201ENSMUST00000197666 938 ntBASIC13.84□□□□□ -0.19
Col6a4A2AX52 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a4A2AX52 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a4A2AX52 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a4A2AX52 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a4A2AX52 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a4A2AX52 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a4A2AX52 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a4A2AX52 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC13.84□□□□□ -0.19
Col6a4A2AX52 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a4A2AX52 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Col6a4A2AX52 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a4A2AX52 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC13.84□□□□□ -0.19
Col6a4A2AX52 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a4A2AX52 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC13.84□□□□□ -0.19
Col6a4A2AX52 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC13.84□□□□□ -0.19
Col6a4A2AX52 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC13.84□□□□□ -0.19
Col6a4A2AX52 CT009713.7-201ENSMUST00000224689 571 ntBASIC13.84□□□□□ -0.19
Col6a4A2AX52 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Col6a4A2AX52 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Col6a4A2AX52 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Col6a4A2AX52 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col6a4A2AX52 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Col6a4A2AX52 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col6a4A2AX52 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col6a4A2AX52 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col6a4A2AX52 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
Col6a4A2AX52 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col6a4A2AX52 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col6a4A2AX52 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col6a4A2AX52 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col6a4A2AX52 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC13.83□□□□□ -0.2
Col6a4A2AX52 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
Col6a4A2AX52 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col6a4A2AX52 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Col6a4A2AX52 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col6a4A2AX52 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col6a4A2AX52 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col6a4A2AX52 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col6a4A2AX52 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col6a4A2AX52 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col6a4A2AX52 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col6a4A2AX52 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col6a4A2AX52 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Col6a4A2AX52 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col6a4A2AX52 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col6a4A2AX52 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a4A2AX52 Gm10576-201ENSMUST00000191927 825 ntBASIC13.82□□□□□ -0.2
Col6a4A2AX52 Ndufaf2-202ENSMUST00000223734 556 ntBASIC13.82□□□□□ -0.2
Col6a4A2AX52 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.82□□□□□ -0.2
Col6a4A2AX52 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Col6a4A2AX52 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a4A2AX52 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a4A2AX52 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a4A2AX52 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a4A2AX52 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Col6a4A2AX52 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a4A2AX52 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a4A2AX52 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a4A2AX52 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a4A2AX52 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a4A2AX52 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a4A2AX52 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a4A2AX52 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a4A2AX52 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a4A2AX52 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a4A2AX52 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a4A2AX52 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Col6a4A2AX52 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a4A2AX52 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a4A2AX52 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a4A2AX52 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a4A2AX52 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a4A2AX52 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC13.82□□□□□ -0.2
Col6a4A2AX52 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC13.82□□□□□ -0.2
Col6a4A2AX52 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC13.82□□□□□ -0.2
Col6a4A2AX52 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a4A2AX52 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Col6a4A2AX52 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Col6a4A2AX52 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a4A2AX52 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a4A2AX52 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC13.82□□□□□ -0.2
Col6a4A2AX52 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a4A2AX52 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a4A2AX52 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a4A2AX52 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms