Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ubr4A2AN08 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Ubr4A2AN08 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Ubr4A2AN08 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Ubr4A2AN08 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ubr4A2AN08 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Ubr4A2AN08 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ubr4A2AN08 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC8.66□□□□□ -1.02
Ubr4A2AN08 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ubr4A2AN08 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ubr4A2AN08 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Ubr4A2AN08 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ubr4A2AN08 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ubr4A2AN08 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ubr4A2AN08 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC8.66□□□□□ -1.02
Ubr4A2AN08 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Ubr4A2AN08 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Ubr4A2AN08 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ubr4A2AN08 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Ubr4A2AN08 Gm45384-201ENSMUST00000210451 277 ntBASIC8.66□□□□□ -1.02
Ubr4A2AN08 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC8.66□□□□□ -1.02
Ubr4A2AN08 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ubr4A2AN08 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Ubr4A2AN08 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Ubr4A2AN08 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Ubr4A2AN08 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Ubr4A2AN08 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Ubr4A2AN08 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
Ubr4A2AN08 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
Ubr4A2AN08 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Ubr4A2AN08 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC8.65□□□□□ -1.02
Ubr4A2AN08 Gm43125-201ENSMUST00000201724 730 ntBASIC8.65□□□□□ -1.02
Ubr4A2AN08 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Ubr4A2AN08 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC8.65□□□□□ -1.02
Ubr4A2AN08 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Ubr4A2AN08 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC8.65□□□□□ -1.02
Ubr4A2AN08 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Ubr4A2AN08 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Ubr4A2AN08 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
Ubr4A2AN08 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
Ubr4A2AN08 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Ubr4A2AN08 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
Ubr4A2AN08 Gm15442-201ENSMUST00000117905 1527 ntBASIC8.65□□□□□ -1.02
Ubr4A2AN08 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Ubr4A2AN08 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Ubr4A2AN08 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Ubr4A2AN08 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Ubr4A2AN08 Gm11453-201ENSMUST00000117318 1007 ntBASIC8.65□□□□□ -1.02
Ubr4A2AN08 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC8.65□□□□□ -1.02
Ubr4A2AN08 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC8.65□□□□□ -1.02
Ubr4A2AN08 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC8.65□□□□□ -1.02
Ubr4A2AN08 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC8.65□□□□□ -1.02
Ubr4A2AN08 Mir7684-201ENSMUST00000183858 60 ntBASIC8.65□□□□□ -1.02
Ubr4A2AN08 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Ubr4A2AN08 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
Ubr4A2AN08 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC8.65□□□□□ -1.02
Ubr4A2AN08 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Ubr4A2AN08 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
Ubr4A2AN08 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Ubr4A2AN08 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Ubr4A2AN08 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Ubr4A2AN08 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC8.65□□□□□ -1.03
Ubr4A2AN08 Gm45059-201ENSMUST00000205558 1077 ntBASIC8.65□□□□□ -1.03
Ubr4A2AN08 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC8.65□□□□□ -1.03
Ubr4A2AN08 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.03
Ubr4A2AN08 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC8.65□□□□□ -1.03
Ubr4A2AN08 Mir8102-201ENSMUST00000184148 139 ntBASIC8.65□□□□□ -1.03
Ubr4A2AN08 Gm9908-201ENSMUST00000211534 448 ntBASIC8.65□□□□□ -1.03
Ubr4A2AN08 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Ubr4A2AN08 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ubr4A2AN08 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Ubr4A2AN08 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ubr4A2AN08 Gm5628-201ENSMUST00000222318 1049 ntBASIC8.64□□□□□ -1.03
Ubr4A2AN08 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ubr4A2AN08 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ubr4A2AN08 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ubr4A2AN08 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ubr4A2AN08 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Ubr4A2AN08 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
Ubr4A2AN08 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ubr4A2AN08 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ubr4A2AN08 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ubr4A2AN08 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
Ubr4A2AN08 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ubr4A2AN08 Mettl6-204ENSMUST00000227595 1027 ntBASIC8.64□□□□□ -1.03
Ubr4A2AN08 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ubr4A2AN08 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ubr4A2AN08 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ubr4A2AN08 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC8.64□□□□□ -1.03
Ubr4A2AN08 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
Ubr4A2AN08 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ubr4A2AN08 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Ubr4A2AN08 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
Ubr4A2AN08 Gm42693-201ENSMUST00000196779 631 ntBASIC8.64□□□□□ -1.03
Ubr4A2AN08 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ubr4A2AN08 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ubr4A2AN08 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ubr4A2AN08 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ubr4A2AN08 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ubr4A2AN08 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC8.64□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms