Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv17A0A140T8P8 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv17A0A140T8P8 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv17A0A140T8P8 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv17A0A140T8P8 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv17A0A140T8P8 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv17A0A140T8P8 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv17A0A140T8P8 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv17A0A140T8P8 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trbv17A0A140T8P8 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Trbv17A0A140T8P8 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv17A0A140T8P8 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Trbv17A0A140T8P8 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv17A0A140T8P8 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trbv17A0A140T8P8 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv17A0A140T8P8 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trbv17A0A140T8P8 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv17A0A140T8P8 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trbv17A0A140T8P8 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv17A0A140T8P8 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC12.63□□□□□ -0.39
Trbv17A0A140T8P8 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv17A0A140T8P8 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv17A0A140T8P8 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv17A0A140T8P8 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC12.62□□□□□ -0.39
Trbv17A0A140T8P8 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv17A0A140T8P8 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv17A0A140T8P8 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv17A0A140T8P8 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv17A0A140T8P8 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv17A0A140T8P8 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv17A0A140T8P8 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv17A0A140T8P8 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv17A0A140T8P8 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC12.62□□□□□ -0.39
Trbv17A0A140T8P8 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC12.62□□□□□ -0.39
Trbv17A0A140T8P8 Mir5130-201ENSMUST00000175160 84 ntBASIC12.62□□□□□ -0.39
Trbv17A0A140T8P8 Gm7889-201ENSMUST00000185591 958 ntBASIC12.62□□□□□ -0.39
Trbv17A0A140T8P8 Gm18959-201ENSMUST00000208954 655 ntBASIC12.62□□□□□ -0.39
Trbv17A0A140T8P8 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Trbv17A0A140T8P8 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv17A0A140T8P8 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv17A0A140T8P8 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trbv17A0A140T8P8 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC12.62□□□□□ -0.39
Trbv17A0A140T8P8 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv17A0A140T8P8 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv17A0A140T8P8 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv17A0A140T8P8 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv17A0A140T8P8 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv17A0A140T8P8 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv17A0A140T8P8 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv17A0A140T8P8 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv17A0A140T8P8 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC12.62□□□□□ -0.39
Trbv17A0A140T8P8 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv17A0A140T8P8 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv17A0A140T8P8 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv17A0A140T8P8 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trbv17A0A140T8P8 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trbv17A0A140T8P8 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv17A0A140T8P8 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trbv17A0A140T8P8 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC12.61□□□□□ -0.39
Trbv17A0A140T8P8 Gm11620-201ENSMUST00000118770 1845 ntBASIC12.61□□□□□ -0.39
Trbv17A0A140T8P8 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv17A0A140T8P8 Gm13474-201ENSMUST00000122466 815 ntBASIC12.61□□□□□ -0.39
Trbv17A0A140T8P8 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC12.61□□□□□ -0.39
Trbv17A0A140T8P8 Mir7071-201ENSMUST00000184847 69 ntBASIC12.61□□□□□ -0.39
Trbv17A0A140T8P8 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC12.61□□□□□ -0.39
Trbv17A0A140T8P8 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv17A0A140T8P8 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trbv17A0A140T8P8 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv17A0A140T8P8 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv17A0A140T8P8 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trbv17A0A140T8P8 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv17A0A140T8P8 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv17A0A140T8P8 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv17A0A140T8P8 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv17A0A140T8P8 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv17A0A140T8P8 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv17A0A140T8P8 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv17A0A140T8P8 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv17A0A140T8P8 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC12.61□□□□□ -0.39
Trbv17A0A140T8P8 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trbv17A0A140T8P8 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv17A0A140T8P8 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv17A0A140T8P8 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv17A0A140T8P8 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trbv17A0A140T8P8 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv17A0A140T8P8 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv17A0A140T8P8 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trbv17A0A140T8P8 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv17A0A140T8P8 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv17A0A140T8P8 Gm16061-201ENSMUST00000122167 857 ntBASIC12.6□□□□□ -0.39
Trbv17A0A140T8P8 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC12.6□□□□□ -0.39
Trbv17A0A140T8P8 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Trbv17A0A140T8P8 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv17A0A140T8P8 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv17A0A140T8P8 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv17A0A140T8P8 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv17A0A140T8P8 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv17A0A140T8P8 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv17A0A140T8P8 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Trbv17A0A140T8P8 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms