Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC10.9□□□□□ -0.66
Igkv1-88A0A140T8N1 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Igkv1-88A0A140T8N1 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Igkv1-88A0A140T8N1 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Igkv1-88A0A140T8N1 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Igkv1-88A0A140T8N1 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Igkv1-88A0A140T8N1 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Igkv1-88A0A140T8N1 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.66
Igkv1-88A0A140T8N1 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Igkv1-88A0A140T8N1 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Igkv1-88A0A140T8N1 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Igkv1-88A0A140T8N1 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Igkv1-88A0A140T8N1 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC10.9□□□□□ -0.66
Igkv1-88A0A140T8N1 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Igkv1-88A0A140T8N1 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Igkv1-88A0A140T8N1 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Igkv1-88A0A140T8N1 Gm10602-201ENSMUST00000098239 609 ntBASIC10.9□□□□□ -0.66
Igkv1-88A0A140T8N1 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Igkv1-88A0A140T8N1 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Igkv1-88A0A140T8N1 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Igkv1-88A0A140T8N1 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Igkv1-88A0A140T8N1 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Igkv1-88A0A140T8N1 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Igkv1-88A0A140T8N1 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Igkv1-88A0A140T8N1 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Igkv1-88A0A140T8N1 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Igkv1-88A0A140T8N1 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
Igkv1-88A0A140T8N1 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Igkv1-88A0A140T8N1 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Igkv1-88A0A140T8N1 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Igkv1-88A0A140T8N1 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Igkv1-88A0A140T8N1 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Igkv1-88A0A140T8N1 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Igkv1-88A0A140T8N1 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Igkv1-88A0A140T8N1 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Igkv1-88A0A140T8N1 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC10.89□□□□□ -0.67
Igkv1-88A0A140T8N1 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Igkv1-88A0A140T8N1 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Igkv1-88A0A140T8N1 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Igkv1-88A0A140T8N1 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Igkv1-88A0A140T8N1 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Igkv1-88A0A140T8N1 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Igkv1-88A0A140T8N1 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Igkv1-88A0A140T8N1 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Igkv1-88A0A140T8N1 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Igkv1-88A0A140T8N1 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
Igkv1-88A0A140T8N1 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Igkv1-88A0A140T8N1 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Igkv1-88A0A140T8N1 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Igkv1-88A0A140T8N1 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Igkv1-88A0A140T8N1 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Igkv1-88A0A140T8N1 Gm12933-201ENSMUST00000120203 872 ntBASIC10.89□□□□□ -0.67
Igkv1-88A0A140T8N1 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Igkv1-88A0A140T8N1 Gm12382-201ENSMUST00000122005 922 ntBASIC10.89□□□□□ -0.67
Igkv1-88A0A140T8N1 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Igkv1-88A0A140T8N1 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Igkv1-88A0A140T8N1 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Igkv1-88A0A140T8N1 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC10.89□□□□□ -0.67
Igkv1-88A0A140T8N1 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Igkv1-88A0A140T8N1 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Igkv1-88A0A140T8N1 Dio3-201ENSMUST00000097228 1449 ntBASIC10.89□□□□□ -0.67
Igkv1-88A0A140T8N1 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Igkv1-88A0A140T8N1 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Igkv1-88A0A140T8N1 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Igkv1-88A0A140T8N1 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Igkv1-88A0A140T8N1 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Igkv1-88A0A140T8N1 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC10.89□□□□□ -0.67
Igkv1-88A0A140T8N1 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Igkv1-88A0A140T8N1 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Igkv1-88A0A140T8N1 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Igkv1-88A0A140T8N1 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Igkv1-88A0A140T8N1 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igkv1-88A0A140T8N1 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igkv1-88A0A140T8N1 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igkv1-88A0A140T8N1 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Igkv1-88A0A140T8N1 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Igkv1-88A0A140T8N1 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igkv1-88A0A140T8N1 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igkv1-88A0A140T8N1 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC10.88□□□□□ -0.67
Igkv1-88A0A140T8N1 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igkv1-88A0A140T8N1 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Igkv1-88A0A140T8N1 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igkv1-88A0A140T8N1 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igkv1-88A0A140T8N1 Gm11249-201ENSMUST00000117071 859 ntBASIC10.88□□□□□ -0.67
Igkv1-88A0A140T8N1 Gm13158-201ENSMUST00000122007 736 ntBASIC10.88□□□□□ -0.67
Igkv1-88A0A140T8N1 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC10.88□□□□□ -0.67
Igkv1-88A0A140T8N1 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC10.88□□□□□ -0.67
Igkv1-88A0A140T8N1 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC10.88□□□□□ -0.67
Igkv1-88A0A140T8N1 Gm42545-201ENSMUST00000202755 922 ntBASIC10.88□□□□□ -0.67
Igkv1-88A0A140T8N1 AC166341.7-201ENSMUST00000221698 126 ntBASIC10.88□□□□□ -0.67
Igkv1-88A0A140T8N1 AC163280.1-201ENSMUST00000228194 1100 ntBASIC10.88□□□□□ -0.67
Igkv1-88A0A140T8N1 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igkv1-88A0A140T8N1 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igkv1-88A0A140T8N1 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Igkv1-88A0A140T8N1 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igkv1-88A0A140T8N1 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Igkv1-88A0A140T8N1 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igkv1-88A0A140T8N1 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igkv1-88A0A140T8N1 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Igkv1-88A0A140T8N1 Gm5421-201ENSMUST00000181698 2354 ntBASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms