Protein–RNA interactions for Protein: A0A140LI48

Pcdhgb8, Protocadherin gamma subfamily B, 8, mousemouse

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb8A0A140LI48 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhgb8A0A140LI48 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhgb8A0A140LI48 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhgb8A0A140LI48 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhgb8A0A140LI48 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhgb8A0A140LI48 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhgb8A0A140LI48 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhgb8A0A140LI48 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Pcdhgb8A0A140LI48 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhgb8A0A140LI48 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhgb8A0A140LI48 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Pcdhgb8A0A140LI48 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Pcdhgb8A0A140LI48 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Pcdhgb8A0A140LI48 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhgb8A0A140LI48 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC14.9□□□□□ -0.02
Pcdhgb8A0A140LI48 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC14.9□□□□□ -0.02
Pcdhgb8A0A140LI48 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhgb8A0A140LI48 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Pcdhgb8A0A140LI48 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Pcdhgb8A0A140LI48 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Pcdhgb8A0A140LI48 Gm43799-201ENSMUST00000201845 579 ntBASIC14.9□□□□□ -0.02
Pcdhgb8A0A140LI48 AC153881.2-201ENSMUST00000214877 204 ntBASIC14.9□□□□□ -0.02
Pcdhgb8A0A140LI48 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhgb8A0A140LI48 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhgb8A0A140LI48 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.9□□□□□ -0.02
Pcdhgb8A0A140LI48 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhgb8A0A140LI48 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhgb8A0A140LI48 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhgb8A0A140LI48 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhgb8A0A140LI48 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Pcdhgb8A0A140LI48 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Pcdhgb8A0A140LI48 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhgb8A0A140LI48 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhgb8A0A140LI48 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhgb8A0A140LI48 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhgb8A0A140LI48 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhgb8A0A140LI48 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhgb8A0A140LI48 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Pcdhgb8A0A140LI48 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
Pcdhgb8A0A140LI48 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhgb8A0A140LI48 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhgb8A0A140LI48 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.89□□□□□ -0.03
Pcdhgb8A0A140LI48 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhgb8A0A140LI48 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
Pcdhgb8A0A140LI48 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhgb8A0A140LI48 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhgb8A0A140LI48 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Pcdhgb8A0A140LI48 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhgb8A0A140LI48 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC14.89□□□□□ -0.03
Pcdhgb8A0A140LI48 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhgb8A0A140LI48 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhgb8A0A140LI48 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhgb8A0A140LI48 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhgb8A0A140LI48 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhgb8A0A140LI48 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhgb8A0A140LI48 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Pcdhgb8A0A140LI48 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhgb8A0A140LI48 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhgb8A0A140LI48 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhgb8A0A140LI48 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhgb8A0A140LI48 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Pcdhgb8A0A140LI48 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhgb8A0A140LI48 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhgb8A0A140LI48 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhgb8A0A140LI48 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Pcdhgb8A0A140LI48 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Pcdhgb8A0A140LI48 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhgb8A0A140LI48 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhgb8A0A140LI48 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.88□□□□□ -0.03
Pcdhgb8A0A140LI48 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhgb8A0A140LI48 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhgb8A0A140LI48 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhgb8A0A140LI48 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhgb8A0A140LI48 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhgb8A0A140LI48 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Pcdhgb8A0A140LI48 Gm10517-202ENSMUST00000192970 758 ntBASIC14.88□□□□□ -0.03
Pcdhgb8A0A140LI48 Gm4974-201ENSMUST00000209974 875 ntBASIC14.88□□□□□ -0.03
Pcdhgb8A0A140LI48 AC121577.1-201ENSMUST00000227302 707 ntBASIC14.88□□□□□ -0.03
Pcdhgb8A0A140LI48 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhgb8A0A140LI48 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhgb8A0A140LI48 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhgb8A0A140LI48 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhgb8A0A140LI48 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhgb8A0A140LI48 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Pcdhgb8A0A140LI48 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhgb8A0A140LI48 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhgb8A0A140LI48 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhgb8A0A140LI48 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC14.88□□□□□ -0.03
Pcdhgb8A0A140LI48 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Pcdhgb8A0A140LI48 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Pcdhgb8A0A140LI48 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Pcdhgb8A0A140LI48 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.88□□□□□ -0.03
Pcdhgb8A0A140LI48 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.88□□□□□ -0.03
Pcdhgb8A0A140LI48 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhgb8A0A140LI48 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhgb8A0A140LI48 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.87□□□□□ -0.03
Pcdhgb8A0A140LI48 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Pcdhgb8A0A140LI48 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.87□□□□□ -0.03
Pcdhgb8A0A140LI48 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhgb8A0A140LI48 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms