Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9d-4A0A0G2JG37 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9d-4A0A0G2JG37 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9d-4A0A0G2JG37 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Trav9d-4A0A0G2JG37 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav9d-4A0A0G2JG37 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9d-4A0A0G2JG37 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9d-4A0A0G2JG37 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9d-4A0A0G2JG37 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9d-4A0A0G2JG37 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9d-4A0A0G2JG37 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Trav9d-4A0A0G2JG37 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9d-4A0A0G2JG37 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC11.32□□□□□ -0.6
Trav9d-4A0A0G2JG37 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Trav9d-4A0A0G2JG37 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Trav9d-4A0A0G2JG37 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trav9d-4A0A0G2JG37 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9d-4A0A0G2JG37 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav9d-4A0A0G2JG37 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9d-4A0A0G2JG37 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9d-4A0A0G2JG37 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9d-4A0A0G2JG37 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trav9d-4A0A0G2JG37 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9d-4A0A0G2JG37 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Trav9d-4A0A0G2JG37 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9d-4A0A0G2JG37 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9d-4A0A0G2JG37 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9d-4A0A0G2JG37 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9d-4A0A0G2JG37 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9d-4A0A0G2JG37 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9d-4A0A0G2JG37 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9d-4A0A0G2JG37 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9d-4A0A0G2JG37 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9d-4A0A0G2JG37 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9d-4A0A0G2JG37 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9d-4A0A0G2JG37 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9d-4A0A0G2JG37 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Trav9d-4A0A0G2JG37 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Trav9d-4A0A0G2JG37 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Trav9d-4A0A0G2JG37 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9d-4A0A0G2JG37 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC11.31□□□□□ -0.6
Trav9d-4A0A0G2JG37 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9d-4A0A0G2JG37 Gm7291-201ENSMUST00000199147 382 ntBASIC11.31□□□□□ -0.6
Trav9d-4A0A0G2JG37 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9d-4A0A0G2JG37 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9d-4A0A0G2JG37 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9d-4A0A0G2JG37 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9d-4A0A0G2JG37 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9d-4A0A0G2JG37 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9d-4A0A0G2JG37 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9d-4A0A0G2JG37 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9d-4A0A0G2JG37 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9d-4A0A0G2JG37 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9d-4A0A0G2JG37 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trav9d-4A0A0G2JG37 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9d-4A0A0G2JG37 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9d-4A0A0G2JG37 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9d-4A0A0G2JG37 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9d-4A0A0G2JG37 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9d-4A0A0G2JG37 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9d-4A0A0G2JG37 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9d-4A0A0G2JG37 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9d-4A0A0G2JG37 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC11.3□□□□□ -0.6
Trav9d-4A0A0G2JG37 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9d-4A0A0G2JG37 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC11.3□□□□□ -0.6
Trav9d-4A0A0G2JG37 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9d-4A0A0G2JG37 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trav9d-4A0A0G2JG37 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Trav9d-4A0A0G2JG37 Gm5421-201ENSMUST00000181698 2354 ntBASIC11.3□□□□□ -0.6
Trav9d-4A0A0G2JG37 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9d-4A0A0G2JG37 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trav9d-4A0A0G2JG37 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Trav9d-4A0A0G2JG37 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trav9d-4A0A0G2JG37 Gm42569-201ENSMUST00000200539 472 ntBASIC11.3□□□□□ -0.6
Trav9d-4A0A0G2JG37 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Trav9d-4A0A0G2JG37 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Trav9d-4A0A0G2JG37 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9d-4A0A0G2JG37 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9d-4A0A0G2JG37 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9d-4A0A0G2JG37 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC11.3□□□□□ -0.6
Trav9d-4A0A0G2JG37 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9d-4A0A0G2JG37 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9d-4A0A0G2JG37 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9d-4A0A0G2JG37 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9d-4A0A0G2JG37 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9d-4A0A0G2JG37 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9d-4A0A0G2JG37 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC11.29□□□□□ -0.6
Trav9d-4A0A0G2JG37 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC11.29□□□□□ -0.6
Trav9d-4A0A0G2JG37 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9d-4A0A0G2JG37 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9d-4A0A0G2JG37 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Trav9d-4A0A0G2JG37 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9d-4A0A0G2JG37 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9d-4A0A0G2JG37 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9d-4A0A0G2JG37 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9d-4A0A0G2JG37 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9d-4A0A0G2JG37 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trav9d-4A0A0G2JG37 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC11.29□□□□□ -0.6
Trav9d-4A0A0G2JG37 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC11.29□□□□□ -0.6
Trav9d-4A0A0G2JG37 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms