Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC11.37□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Dancr-204ENSMUST00000132389 2347 ntBASIC11.37□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav13d-4A0A0G2JFX3 AL590614.2-201ENSMUST00000225374 1937 ntBASIC11.37□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Gm43183-201ENSMUST00000200632 547 ntBASIC11.37□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC11.37□□□□□ -0.59
Trav13d-4A0A0G2JFX3 AC164629.5-201ENSMUST00000220387 632 ntBASIC11.37□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Trav13d-4A0A0G2JFX3 CT010444.2-201ENSMUST00000217877 1629 ntBASIC11.37□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13d-4A0A0G2JFX3 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13d-4A0A0G2JFX3 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC11.36□□□□□ -0.59
Trav13d-4A0A0G2JFX3 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC11.36□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Nrn1-203ENSMUST00000223611 1443 ntBASIC11.35□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Gm18666-201ENSMUST00000190039 958 ntBASIC11.35□□□□□ -0.59
Trav13d-4A0A0G2JFX3 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC11.35□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Gm42918-201ENSMUST00000199249 1580 ntBASIC11.35□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13d-4A0A0G2JFX3 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC11.35□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC11.35□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms