Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Gm44549-201ENSMUST00000208351 577 ntBASIC12.52□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Wnt10b-205ENSMUST00000226846 1204 ntBASIC12.52□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.52□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.51□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3n-3A0A0G2JEM0 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3n-3A0A0G2JEM0 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC12.51□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3n-3A0A0G2JEM0 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.51□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC12.51□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3n-3A0A0G2JEM0 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.5□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC12.5□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3n-3A0A0G2JEM0 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trav3n-3A0A0G2JEM0 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC12.5□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.5□□□□□ -0.41
Trav3n-3A0A0G2JEM0 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3n-3A0A0G2JEM0 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC12.49□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Gm7291-201ENSMUST00000199147 382 ntBASIC12.49□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3n-3A0A0G2JEM0 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms