Protein–RNA interactions for Protein: A0A0G2JE47

Igkv8-28, Immunoglobulin kappa variable 8-28 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-28A0A0G2JE47 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Igkv8-28A0A0G2JE47 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Igkv8-28A0A0G2JE47 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC10.35□□□□□ -0.75
Igkv8-28A0A0G2JE47 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC10.35□□□□□ -0.75
Igkv8-28A0A0G2JE47 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC10.35□□□□□ -0.75
Igkv8-28A0A0G2JE47 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Igkv8-28A0A0G2JE47 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Igkv8-28A0A0G2JE47 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC10.35□□□□□ -0.75
Igkv8-28A0A0G2JE47 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC10.35□□□□□ -0.75
Igkv8-28A0A0G2JE47 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Igkv8-28A0A0G2JE47 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Igkv8-28A0A0G2JE47 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Igkv8-28A0A0G2JE47 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Igkv8-28A0A0G2JE47 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC10.35□□□□□ -0.75
Igkv8-28A0A0G2JE47 Gm43598-201ENSMUST00000202482 2479 ntBASIC10.35□□□□□ -0.75
Igkv8-28A0A0G2JE47 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Igkv8-28A0A0G2JE47 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Igkv8-28A0A0G2JE47 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Igkv8-28A0A0G2JE47 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Igkv8-28A0A0G2JE47 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Igkv8-28A0A0G2JE47 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Igkv8-28A0A0G2JE47 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Igkv8-28A0A0G2JE47 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Igkv8-28A0A0G2JE47 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Igkv8-28A0A0G2JE47 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Igkv8-28A0A0G2JE47 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Igkv8-28A0A0G2JE47 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Igkv8-28A0A0G2JE47 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC10.35□□□□□ -0.75
Igkv8-28A0A0G2JE47 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Igkv8-28A0A0G2JE47 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Igkv8-28A0A0G2JE47 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv8-28A0A0G2JE47 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv8-28A0A0G2JE47 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv8-28A0A0G2JE47 Gm14026-201ENSMUST00000120625 1789 ntBASIC10.34□□□□□ -0.75
Igkv8-28A0A0G2JE47 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv8-28A0A0G2JE47 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv8-28A0A0G2JE47 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC10.34□□□□□ -0.75
Igkv8-28A0A0G2JE47 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv8-28A0A0G2JE47 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv8-28A0A0G2JE47 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv8-28A0A0G2JE47 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv8-28A0A0G2JE47 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Igkv8-28A0A0G2JE47 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Igkv8-28A0A0G2JE47 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC10.34□□□□□ -0.75
Igkv8-28A0A0G2JE47 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv8-28A0A0G2JE47 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC10.34□□□□□ -0.75
Igkv8-28A0A0G2JE47 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv8-28A0A0G2JE47 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv8-28A0A0G2JE47 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC10.34□□□□□ -0.75
Igkv8-28A0A0G2JE47 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv8-28A0A0G2JE47 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv8-28A0A0G2JE47 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC10.34□□□□□ -0.75
Igkv8-28A0A0G2JE47 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC10.34□□□□□ -0.75
Igkv8-28A0A0G2JE47 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Igkv8-28A0A0G2JE47 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv8-28A0A0G2JE47 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv8-28A0A0G2JE47 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv8-28A0A0G2JE47 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv8-28A0A0G2JE47 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv8-28A0A0G2JE47 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Igkv8-28A0A0G2JE47 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv8-28A0A0G2JE47 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv8-28A0A0G2JE47 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv8-28A0A0G2JE47 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv8-28A0A0G2JE47 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv8-28A0A0G2JE47 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv8-28A0A0G2JE47 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv8-28A0A0G2JE47 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv8-28A0A0G2JE47 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC10.33□□□□□ -0.75
Igkv8-28A0A0G2JE47 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC10.33□□□□□ -0.76
Igkv8-28A0A0G2JE47 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv8-28A0A0G2JE47 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv8-28A0A0G2JE47 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv8-28A0A0G2JE47 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv8-28A0A0G2JE47 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv8-28A0A0G2JE47 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv8-28A0A0G2JE47 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv8-28A0A0G2JE47 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv8-28A0A0G2JE47 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC10.33□□□□□ -0.76
Igkv8-28A0A0G2JE47 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv8-28A0A0G2JE47 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv8-28A0A0G2JE47 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv8-28A0A0G2JE47 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv8-28A0A0G2JE47 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv8-28A0A0G2JE47 Prob1-201ENSMUST00000097619 3021 ntBASIC10.33□□□□□ -0.76
Igkv8-28A0A0G2JE47 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
Igkv8-28A0A0G2JE47 Gm13401-201ENSMUST00000117074 291 ntBASIC10.33□□□□□ -0.76
Igkv8-28A0A0G2JE47 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC10.33□□□□□ -0.76
Igkv8-28A0A0G2JE47 Gm42642-201ENSMUST00000200683 355 ntBASIC10.33□□□□□ -0.76
Igkv8-28A0A0G2JE47 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC10.33□□□□□ -0.76
Igkv8-28A0A0G2JE47 Gm7514-201ENSMUST00000209475 934 ntBASIC10.33□□□□□ -0.76
Igkv8-28A0A0G2JE47 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv8-28A0A0G2JE47 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv8-28A0A0G2JE47 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
Igkv8-28A0A0G2JE47 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv8-28A0A0G2JE47 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Igkv8-28A0A0G2JE47 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv8-28A0A0G2JE47 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv8-28A0A0G2JE47 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Igkv8-28A0A0G2JE47 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms