Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav19A0A0B4J1K4 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav19A0A0B4J1K4 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Trav19A0A0B4J1K4 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trav19A0A0B4J1K4 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav19A0A0B4J1K4 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav19A0A0B4J1K4 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav19A0A0B4J1K4 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav19A0A0B4J1K4 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav19A0A0B4J1K4 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Trav19A0A0B4J1K4 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav19A0A0B4J1K4 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav19A0A0B4J1K4 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav19A0A0B4J1K4 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav19A0A0B4J1K4 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav19A0A0B4J1K4 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav19A0A0B4J1K4 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav19A0A0B4J1K4 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC12.34□□□□□ -0.43
Trav19A0A0B4J1K4 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav19A0A0B4J1K4 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav19A0A0B4J1K4 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav19A0A0B4J1K4 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Trav19A0A0B4J1K4 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav19A0A0B4J1K4 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC12.33□□□□□ -0.43
Trav19A0A0B4J1K4 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Trav19A0A0B4J1K4 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav19A0A0B4J1K4 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav19A0A0B4J1K4 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav19A0A0B4J1K4 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav19A0A0B4J1K4 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav19A0A0B4J1K4 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trav19A0A0B4J1K4 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav19A0A0B4J1K4 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav19A0A0B4J1K4 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC12.33□□□□□ -0.44
Trav19A0A0B4J1K4 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
Trav19A0A0B4J1K4 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav19A0A0B4J1K4 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav19A0A0B4J1K4 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC12.33□□□□□ -0.44
Trav19A0A0B4J1K4 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC12.33□□□□□ -0.44
Trav19A0A0B4J1K4 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav19A0A0B4J1K4 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav19A0A0B4J1K4 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav19A0A0B4J1K4 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC12.33□□□□□ -0.44
Trav19A0A0B4J1K4 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav19A0A0B4J1K4 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trav19A0A0B4J1K4 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav19A0A0B4J1K4 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav19A0A0B4J1K4 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav19A0A0B4J1K4 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav19A0A0B4J1K4 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav19A0A0B4J1K4 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Trav19A0A0B4J1K4 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav19A0A0B4J1K4 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav19A0A0B4J1K4 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav19A0A0B4J1K4 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav19A0A0B4J1K4 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav19A0A0B4J1K4 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav19A0A0B4J1K4 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav19A0A0B4J1K4 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav19A0A0B4J1K4 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav19A0A0B4J1K4 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav19A0A0B4J1K4 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav19A0A0B4J1K4 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav19A0A0B4J1K4 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trav19A0A0B4J1K4 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav19A0A0B4J1K4 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav19A0A0B4J1K4 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav19A0A0B4J1K4 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav19A0A0B4J1K4 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC12.32□□□□□ -0.44
Trav19A0A0B4J1K4 Gm18666-201ENSMUST00000190039 958 ntBASIC12.32□□□□□ -0.44
Trav19A0A0B4J1K4 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trav19A0A0B4J1K4 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav19A0A0B4J1K4 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav19A0A0B4J1K4 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav19A0A0B4J1K4 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav19A0A0B4J1K4 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav19A0A0B4J1K4 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC12.32□□□□□ -0.44
Trav19A0A0B4J1K4 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trav19A0A0B4J1K4 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav19A0A0B4J1K4 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav19A0A0B4J1K4 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav19A0A0B4J1K4 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav19A0A0B4J1K4 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav19A0A0B4J1K4 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav19A0A0B4J1K4 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav19A0A0B4J1K4 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav19A0A0B4J1K4 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav19A0A0B4J1K4 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav19A0A0B4J1K4 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav19A0A0B4J1K4 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav19A0A0B4J1K4 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav19A0A0B4J1K4 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav19A0A0B4J1K4 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav19A0A0B4J1K4 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav19A0A0B4J1K4 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav19A0A0B4J1K4 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC12.31□□□□□ -0.44
Trav19A0A0B4J1K4 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav19A0A0B4J1K4 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav19A0A0B4J1K4 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav19A0A0B4J1K4 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms