Protein–RNA interactions for Protein: A0A0B4J1J5

Ighv9-3, Immunoglobulin heavy variable V9-3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv9-3A0A0B4J1J5 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC13.69□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC13.69□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Gm21362-201ENSMUST00000194272 928 ntBASIC13.69□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC13.69□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC13.69□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv9-3A0A0B4J1J5 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC13.68□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ighv9-3A0A0B4J1J5 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Zfp264-201ENSMUST00000208656 1563 ntBASIC13.68□□□□□ -0.22
Ighv9-3A0A0B4J1J5 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Gm7284-201ENSMUST00000131667 944 ntBASIC13.68□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC13.68□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Gm29707-201ENSMUST00000196325 491 ntBASIC13.68□□□□□ -0.22
Ighv9-3A0A0B4J1J5 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC13.67□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC13.67□□□□□ -0.22
Ighv9-3A0A0B4J1J5 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ighv9-3A0A0B4J1J5 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC13.66□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC13.66□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC13.66□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC13.66□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC13.66□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ighv9-3A0A0B4J1J5 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC13.66□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ighv9-3A0A0B4J1J5 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms