Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.73■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.73■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.73■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Igkv5-43A0A0B4J1J2 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.72■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Mir6404-201ENSMUST00000183699 94 ntBASIC16.72■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.72■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.72■□□□□ 0.27
Igkv5-43A0A0B4J1J2 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.72■□□□□ 0.27
Igkv5-43A0A0B4J1J2 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Igkv5-43A0A0B4J1J2 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.72■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.71■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.71■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.7■□□□□ 0.26
Igkv5-43A0A0B4J1J2 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Igkv5-43A0A0B4J1J2 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.7■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.7■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Gm25745-201ENSMUST00000174945 133 ntBASIC16.7■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Igkv5-43A0A0B4J1J2 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.7■□□□□ 0.26
Igkv5-43A0A0B4J1J2 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.7■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.7■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms