Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Trbv16A0A0B4J1H3 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Trbv16A0A0B4J1H3 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv16A0A0B4J1H3 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv16A0A0B4J1H3 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv16A0A0B4J1H3 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv16A0A0B4J1H3 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv16A0A0B4J1H3 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv16A0A0B4J1H3 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv16A0A0B4J1H3 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trbv16A0A0B4J1H3 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv16A0A0B4J1H3 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv16A0A0B4J1H3 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC11.93□□□□□ -0.5
Trbv16A0A0B4J1H3 Gm13181-201ENSMUST00000120117 1069 ntBASIC11.93□□□□□ -0.5
Trbv16A0A0B4J1H3 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC11.93□□□□□ -0.5
Trbv16A0A0B4J1H3 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trbv16A0A0B4J1H3 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
Trbv16A0A0B4J1H3 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC11.93□□□□□ -0.5
Trbv16A0A0B4J1H3 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv16A0A0B4J1H3 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv16A0A0B4J1H3 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv16A0A0B4J1H3 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC11.93□□□□□ -0.5
Trbv16A0A0B4J1H3 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv16A0A0B4J1H3 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC11.93□□□□□ -0.5
Trbv16A0A0B4J1H3 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Trbv16A0A0B4J1H3 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv16A0A0B4J1H3 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv16A0A0B4J1H3 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trbv16A0A0B4J1H3 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv16A0A0B4J1H3 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv16A0A0B4J1H3 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv16A0A0B4J1H3 Wnt10b-204ENSMUST00000226655 1807 ntBASIC11.93□□□□□ -0.5
Trbv16A0A0B4J1H3 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
Trbv16A0A0B4J1H3 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trbv16A0A0B4J1H3 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv16A0A0B4J1H3 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv16A0A0B4J1H3 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv16A0A0B4J1H3 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv16A0A0B4J1H3 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv16A0A0B4J1H3 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv16A0A0B4J1H3 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv16A0A0B4J1H3 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv16A0A0B4J1H3 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv16A0A0B4J1H3 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv16A0A0B4J1H3 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC11.92□□□□□ -0.5
Trbv16A0A0B4J1H3 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv16A0A0B4J1H3 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv16A0A0B4J1H3 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv16A0A0B4J1H3 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv16A0A0B4J1H3 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv16A0A0B4J1H3 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC11.92□□□□□ -0.5
Trbv16A0A0B4J1H3 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv16A0A0B4J1H3 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC11.92□□□□□ -0.5
Trbv16A0A0B4J1H3 Gm12527-201ENSMUST00000117967 564 ntBASIC11.92□□□□□ -0.5
Trbv16A0A0B4J1H3 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC11.92□□□□□ -0.5
Trbv16A0A0B4J1H3 AC175538.1-201ENSMUST00000225343 1269 ntBASIC11.92□□□□□ -0.5
Trbv16A0A0B4J1H3 Timm23-208ENSMUST00000226683 750 ntBASIC11.92□□□□□ -0.5
Trbv16A0A0B4J1H3 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Trbv16A0A0B4J1H3 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv16A0A0B4J1H3 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Trbv16A0A0B4J1H3 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC11.92□□□□□ -0.5
Trbv16A0A0B4J1H3 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv16A0A0B4J1H3 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv16A0A0B4J1H3 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv16A0A0B4J1H3 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trbv16A0A0B4J1H3 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC11.92□□□□□ -0.5
Trbv16A0A0B4J1H3 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv16A0A0B4J1H3 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv16A0A0B4J1H3 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trbv16A0A0B4J1H3 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trbv16A0A0B4J1H3 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv16A0A0B4J1H3 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv16A0A0B4J1H3 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv16A0A0B4J1H3 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trbv16A0A0B4J1H3 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv16A0A0B4J1H3 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv16A0A0B4J1H3 AC154855.1-201ENSMUST00000227353 1458 ntBASIC11.91□□□□□ -0.5
Trbv16A0A0B4J1H3 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv16A0A0B4J1H3 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv16A0A0B4J1H3 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv16A0A0B4J1H3 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv16A0A0B4J1H3 Gm7791-201ENSMUST00000219066 539 ntBASIC11.91□□□□□ -0.5
Trbv16A0A0B4J1H3 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv16A0A0B4J1H3 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv16A0A0B4J1H3 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv16A0A0B4J1H3 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv16A0A0B4J1H3 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv16A0A0B4J1H3 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv16A0A0B4J1H3 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv16A0A0B4J1H3 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv16A0A0B4J1H3 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC11.91□□□□□ -0.5
Trbv16A0A0B4J1H3 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Trbv16A0A0B4J1H3 Actl10-202ENSMUST00000226583 1501 ntBASIC11.91□□□□□ -0.5
Trbv16A0A0B4J1H3 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv16A0A0B4J1H3 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Trbv16A0A0B4J1H3 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv16A0A0B4J1H3 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv16A0A0B4J1H3 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv16A0A0B4J1H3 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Trbv16A0A0B4J1H3 Gfra2-202ENSMUST00000227633 1480 ntBASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms