Protein–RNA interactions for Protein: A0A0A6YYE3

Trbv15, T cell receptor beta, variable 15 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv15A0A0A6YYE3 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trbv15A0A0A6YYE3 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Trbv15A0A0A6YYE3 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv15A0A0A6YYE3 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv15A0A0A6YYE3 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv15A0A0A6YYE3 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv15A0A0A6YYE3 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv15A0A0A6YYE3 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC13.69□□□□□ -0.22
Trbv15A0A0A6YYE3 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC13.69□□□□□ -0.22
Trbv15A0A0A6YYE3 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv15A0A0A6YYE3 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv15A0A0A6YYE3 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv15A0A0A6YYE3 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv15A0A0A6YYE3 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv15A0A0A6YYE3 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv15A0A0A6YYE3 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv15A0A0A6YYE3 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv15A0A0A6YYE3 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv15A0A0A6YYE3 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv15A0A0A6YYE3 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv15A0A0A6YYE3 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trbv15A0A0A6YYE3 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv15A0A0A6YYE3 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trbv15A0A0A6YYE3 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC13.69□□□□□ -0.22
Trbv15A0A0A6YYE3 Gm12896-201ENSMUST00000118430 226 ntBASIC13.69□□□□□ -0.22
Trbv15A0A0A6YYE3 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv15A0A0A6YYE3 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv15A0A0A6YYE3 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv15A0A0A6YYE3 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv15A0A0A6YYE3 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv15A0A0A6YYE3 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC13.69□□□□□ -0.22
Trbv15A0A0A6YYE3 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Trbv15A0A0A6YYE3 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv15A0A0A6YYE3 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv15A0A0A6YYE3 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC13.69□□□□□ -0.22
Trbv15A0A0A6YYE3 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv15A0A0A6YYE3 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv15A0A0A6YYE3 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trbv15A0A0A6YYE3 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv15A0A0A6YYE3 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv15A0A0A6YYE3 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv15A0A0A6YYE3 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv15A0A0A6YYE3 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv15A0A0A6YYE3 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv15A0A0A6YYE3 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
Trbv15A0A0A6YYE3 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Trbv15A0A0A6YYE3 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Trbv15A0A0A6YYE3 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv15A0A0A6YYE3 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv15A0A0A6YYE3 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.68□□□□□ -0.22
Trbv15A0A0A6YYE3 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Trbv15A0A0A6YYE3 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC13.68□□□□□ -0.22
Trbv15A0A0A6YYE3 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC13.68□□□□□ -0.22
Trbv15A0A0A6YYE3 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv15A0A0A6YYE3 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv15A0A0A6YYE3 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv15A0A0A6YYE3 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv15A0A0A6YYE3 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv15A0A0A6YYE3 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv15A0A0A6YYE3 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv15A0A0A6YYE3 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv15A0A0A6YYE3 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Trbv15A0A0A6YYE3 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv15A0A0A6YYE3 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trbv15A0A0A6YYE3 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv15A0A0A6YYE3 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv15A0A0A6YYE3 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv15A0A0A6YYE3 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv15A0A0A6YYE3 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv15A0A0A6YYE3 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC13.67□□□□□ -0.22
Trbv15A0A0A6YYE3 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv15A0A0A6YYE3 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv15A0A0A6YYE3 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv15A0A0A6YYE3 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv15A0A0A6YYE3 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC13.67□□□□□ -0.22
Trbv15A0A0A6YYE3 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv15A0A0A6YYE3 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC13.67□□□□□ -0.22
Trbv15A0A0A6YYE3 AC159205.3-201ENSMUST00000224614 874 ntBASIC13.67□□□□□ -0.22
Trbv15A0A0A6YYE3 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv15A0A0A6YYE3 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv15A0A0A6YYE3 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv15A0A0A6YYE3 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv15A0A0A6YYE3 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv15A0A0A6YYE3 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv15A0A0A6YYE3 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv15A0A0A6YYE3 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv15A0A0A6YYE3 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv15A0A0A6YYE3 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv15A0A0A6YYE3 Wnt10b-204ENSMUST00000226655 1807 ntBASIC13.67□□□□□ -0.22
Trbv15A0A0A6YYE3 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv15A0A0A6YYE3 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv15A0A0A6YYE3 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv15A0A0A6YYE3 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv15A0A0A6YYE3 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC13.66□□□□□ -0.22
Trbv15A0A0A6YYE3 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv15A0A0A6YYE3 Gm43859-201ENSMUST00000200075 1412 ntBASIC13.66□□□□□ -0.22
Trbv15A0A0A6YYE3 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv15A0A0A6YYE3 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv15A0A0A6YYE3 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trbv15A0A0A6YYE3 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms