Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv3A0A0A6YYE2 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv3A0A0A6YYE2 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv3A0A0A6YYE2 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv3A0A0A6YYE2 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv3A0A0A6YYE2 Gm15375-201ENSMUST00000119510 849 ntBASIC12.74□□□□□ -0.37
Trbv3A0A0A6YYE2 Gm15847-201ENSMUST00000121417 1065 ntBASIC12.74□□□□□ -0.37
Trbv3A0A0A6YYE2 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC12.74□□□□□ -0.37
Trbv3A0A0A6YYE2 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC12.74□□□□□ -0.37
Trbv3A0A0A6YYE2 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv3A0A0A6YYE2 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv3A0A0A6YYE2 Gm10493-201ENSMUST00000097270 612 ntBASIC12.74□□□□□ -0.37
Trbv3A0A0A6YYE2 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv3A0A0A6YYE2 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv3A0A0A6YYE2 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv3A0A0A6YYE2 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv3A0A0A6YYE2 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv3A0A0A6YYE2 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC12.74□□□□□ -0.37
Trbv3A0A0A6YYE2 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv3A0A0A6YYE2 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv3A0A0A6YYE2 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv3A0A0A6YYE2 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv3A0A0A6YYE2 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv3A0A0A6YYE2 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv3A0A0A6YYE2 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv3A0A0A6YYE2 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trbv3A0A0A6YYE2 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv3A0A0A6YYE2 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv3A0A0A6YYE2 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv3A0A0A6YYE2 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv3A0A0A6YYE2 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC12.73□□□□□ -0.37
Trbv3A0A0A6YYE2 Gm6211-202ENSMUST00000167849 925 ntBASIC12.73□□□□□ -0.37
Trbv3A0A0A6YYE2 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC12.73□□□□□ -0.37
Trbv3A0A0A6YYE2 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv3A0A0A6YYE2 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC12.73□□□□□ -0.37
Trbv3A0A0A6YYE2 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv3A0A0A6YYE2 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv3A0A0A6YYE2 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv3A0A0A6YYE2 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv3A0A0A6YYE2 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv3A0A0A6YYE2 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv3A0A0A6YYE2 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv3A0A0A6YYE2 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv3A0A0A6YYE2 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv3A0A0A6YYE2 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv3A0A0A6YYE2 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv3A0A0A6YYE2 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trbv3A0A0A6YYE2 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv3A0A0A6YYE2 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Trbv3A0A0A6YYE2 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC12.73□□□□□ -0.37
Trbv3A0A0A6YYE2 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv3A0A0A6YYE2 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv3A0A0A6YYE2 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv3A0A0A6YYE2 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trbv3A0A0A6YYE2 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC12.72□□□□□ -0.37
Trbv3A0A0A6YYE2 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv3A0A0A6YYE2 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trbv3A0A0A6YYE2 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv3A0A0A6YYE2 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trbv3A0A0A6YYE2 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv3A0A0A6YYE2 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv3A0A0A6YYE2 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv3A0A0A6YYE2 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv3A0A0A6YYE2 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv3A0A0A6YYE2 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv3A0A0A6YYE2 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC12.72□□□□□ -0.37
Trbv3A0A0A6YYE2 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv3A0A0A6YYE2 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv3A0A0A6YYE2 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv3A0A0A6YYE2 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv3A0A0A6YYE2 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Trbv3A0A0A6YYE2 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Trbv3A0A0A6YYE2 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC12.72□□□□□ -0.37
Trbv3A0A0A6YYE2 Gm4974-201ENSMUST00000209974 875 ntBASIC12.72□□□□□ -0.37
Trbv3A0A0A6YYE2 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv3A0A0A6YYE2 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv3A0A0A6YYE2 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv3A0A0A6YYE2 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv3A0A0A6YYE2 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trbv3A0A0A6YYE2 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv3A0A0A6YYE2 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv3A0A0A6YYE2 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv3A0A0A6YYE2 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv3A0A0A6YYE2 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv3A0A0A6YYE2 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv3A0A0A6YYE2 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
Trbv3A0A0A6YYE2 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trbv3A0A0A6YYE2 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv3A0A0A6YYE2 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv3A0A0A6YYE2 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv3A0A0A6YYE2 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv3A0A0A6YYE2 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC12.71□□□□□ -0.37
Trbv3A0A0A6YYE2 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv3A0A0A6YYE2 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv3A0A0A6YYE2 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv3A0A0A6YYE2 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv3A0A0A6YYE2 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv3A0A0A6YYE2 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv3A0A0A6YYE2 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv3A0A0A6YYE2 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms