Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Ighv1-42A0A0A6YY38 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-42A0A0A6YY38 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.17■□□□□ 0.02
Ighv1-42A0A0A6YY38 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-42A0A0A6YY38 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC15.17■□□□□ 0.02
Ighv1-42A0A0A6YY38 Gm36967-201ENSMUST00000193814 266 ntBASIC15.17■□□□□ 0.02
Ighv1-42A0A0A6YY38 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-42A0A0A6YY38 Gm6443-201ENSMUST00000203599 874 ntBASIC15.17■□□□□ 0.02
Ighv1-42A0A0A6YY38 Gm6376-201ENSMUST00000209407 580 ntBASIC15.17■□□□□ 0.02
Ighv1-42A0A0A6YY38 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Ighv1-42A0A0A6YY38 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-42A0A0A6YY38 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-42A0A0A6YY38 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-42A0A0A6YY38 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Ighv1-42A0A0A6YY38 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-42A0A0A6YY38 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-42A0A0A6YY38 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-42A0A0A6YY38 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-42A0A0A6YY38 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-42A0A0A6YY38 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-42A0A0A6YY38 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-42A0A0A6YY38 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-42A0A0A6YY38 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Ighv1-42A0A0A6YY38 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.16■□□□□ 0.02
Ighv1-42A0A0A6YY38 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-42A0A0A6YY38 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-42A0A0A6YY38 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-42A0A0A6YY38 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-42A0A0A6YY38 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-42A0A0A6YY38 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.16■□□□□ 0.02
Ighv1-42A0A0A6YY38 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-42A0A0A6YY38 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-42A0A0A6YY38 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-42A0A0A6YY38 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-42A0A0A6YY38 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Ighv1-42A0A0A6YY38 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-42A0A0A6YY38 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-42A0A0A6YY38 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-42A0A0A6YY38 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-42A0A0A6YY38 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-42A0A0A6YY38 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.16■□□□□ 0.02
Ighv1-42A0A0A6YY38 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-42A0A0A6YY38 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-42A0A0A6YY38 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-42A0A0A6YY38 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-42A0A0A6YY38 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-42A0A0A6YY38 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Ighv1-42A0A0A6YY38 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-42A0A0A6YY38 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Ighv1-42A0A0A6YY38 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Ighv1-42A0A0A6YY38 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Ighv1-42A0A0A6YY38 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-42A0A0A6YY38 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-42A0A0A6YY38 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-42A0A0A6YY38 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.15■□□□□ 0.02
Ighv1-42A0A0A6YY38 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC15.15■□□□□ 0.02
Ighv1-42A0A0A6YY38 Gm43514-201ENSMUST00000198852 424 ntBASIC15.15■□□□□ 0.02
Ighv1-42A0A0A6YY38 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.15■□□□□ 0.02
Ighv1-42A0A0A6YY38 Gm9449-201ENSMUST00000207265 1011 ntBASIC15.15■□□□□ 0.02
Ighv1-42A0A0A6YY38 Gm6296-201ENSMUST00000222599 943 ntBASIC15.15■□□□□ 0.02
Ighv1-42A0A0A6YY38 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-42A0A0A6YY38 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Ighv1-42A0A0A6YY38 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.15■□□□□ 0.02
Ighv1-42A0A0A6YY38 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-42A0A0A6YY38 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-42A0A0A6YY38 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-42A0A0A6YY38 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-42A0A0A6YY38 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Ighv1-42A0A0A6YY38 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-42A0A0A6YY38 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-42A0A0A6YY38 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-42A0A0A6YY38 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Ighv1-42A0A0A6YY38 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Ighv1-42A0A0A6YY38 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-42A0A0A6YY38 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-42A0A0A6YY38 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-42A0A0A6YY38 Gm7862-201ENSMUST00000121461 292 ntBASIC15.14■□□□□ 0.01
Ighv1-42A0A0A6YY38 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.14■□□□□ 0.01
Ighv1-42A0A0A6YY38 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.14■□□□□ 0.01
Ighv1-42A0A0A6YY38 Gm25745-201ENSMUST00000174945 133 ntBASIC15.14■□□□□ 0.01
Ighv1-42A0A0A6YY38 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Ighv1-42A0A0A6YY38 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-42A0A0A6YY38 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-42A0A0A6YY38 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Ighv1-42A0A0A6YY38 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-42A0A0A6YY38 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Ighv1-42A0A0A6YY38 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-42A0A0A6YY38 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-42A0A0A6YY38 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-42A0A0A6YY38 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.13■□□□□ 0.01
Ighv1-42A0A0A6YY38 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-42A0A0A6YY38 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Ighv1-42A0A0A6YY38 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-42A0A0A6YY38 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-42A0A0A6YY38 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-42A0A0A6YY38 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-42A0A0A6YY38 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Ighv1-42A0A0A6YY38 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-42A0A0A6YY38 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-42A0A0A6YY38 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms