Protein–RNA interactions for Protein: A0A0A6YWQ1

Trbv23, T cell receptor beta, variable V23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv23A0A0A6YWQ1 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv23A0A0A6YWQ1 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.2□□□□□ -0.14
Trbv23A0A0A6YWQ1 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv23A0A0A6YWQ1 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv23A0A0A6YWQ1 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv23A0A0A6YWQ1 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv23A0A0A6YWQ1 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC14.2□□□□□ -0.14
Trbv23A0A0A6YWQ1 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv23A0A0A6YWQ1 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv23A0A0A6YWQ1 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv23A0A0A6YWQ1 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv23A0A0A6YWQ1 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv23A0A0A6YWQ1 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv23A0A0A6YWQ1 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv23A0A0A6YWQ1 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv23A0A0A6YWQ1 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv23A0A0A6YWQ1 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv23A0A0A6YWQ1 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv23A0A0A6YWQ1 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv23A0A0A6YWQ1 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv23A0A0A6YWQ1 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv23A0A0A6YWQ1 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.19□□□□□ -0.14
Trbv23A0A0A6YWQ1 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv23A0A0A6YWQ1 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Trbv23A0A0A6YWQ1 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC14.19□□□□□ -0.14
Trbv23A0A0A6YWQ1 Gm15378-201ENSMUST00000121894 207 ntBASIC14.19□□□□□ -0.14
Trbv23A0A0A6YWQ1 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv23A0A0A6YWQ1 Gm42545-201ENSMUST00000202755 922 ntBASIC14.19□□□□□ -0.14
Trbv23A0A0A6YWQ1 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv23A0A0A6YWQ1 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Trbv23A0A0A6YWQ1 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv23A0A0A6YWQ1 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv23A0A0A6YWQ1 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv23A0A0A6YWQ1 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv23A0A0A6YWQ1 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv23A0A0A6YWQ1 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trbv23A0A0A6YWQ1 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv23A0A0A6YWQ1 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv23A0A0A6YWQ1 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Trbv23A0A0A6YWQ1 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv23A0A0A6YWQ1 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv23A0A0A6YWQ1 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv23A0A0A6YWQ1 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv23A0A0A6YWQ1 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Trbv23A0A0A6YWQ1 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trbv23A0A0A6YWQ1 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv23A0A0A6YWQ1 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv23A0A0A6YWQ1 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv23A0A0A6YWQ1 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv23A0A0A6YWQ1 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trbv23A0A0A6YWQ1 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv23A0A0A6YWQ1 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC14.18□□□□□ -0.14
Trbv23A0A0A6YWQ1 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv23A0A0A6YWQ1 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv23A0A0A6YWQ1 Gm18025-201ENSMUST00000221733 862 ntBASIC14.18□□□□□ -0.14
Trbv23A0A0A6YWQ1 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv23A0A0A6YWQ1 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trbv23A0A0A6YWQ1 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.18□□□□□ -0.14
Trbv23A0A0A6YWQ1 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv23A0A0A6YWQ1 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv23A0A0A6YWQ1 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Trbv23A0A0A6YWQ1 Gm37820-201ENSMUST00000194021 2147 ntBASIC14.18□□□□□ -0.14
Trbv23A0A0A6YWQ1 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv23A0A0A6YWQ1 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv23A0A0A6YWQ1 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Trbv23A0A0A6YWQ1 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv23A0A0A6YWQ1 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv23A0A0A6YWQ1 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv23A0A0A6YWQ1 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv23A0A0A6YWQ1 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv23A0A0A6YWQ1 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.18□□□□□ -0.14
Trbv23A0A0A6YWQ1 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv23A0A0A6YWQ1 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv23A0A0A6YWQ1 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trbv23A0A0A6YWQ1 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv23A0A0A6YWQ1 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trbv23A0A0A6YWQ1 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv23A0A0A6YWQ1 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv23A0A0A6YWQ1 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trbv23A0A0A6YWQ1 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trbv23A0A0A6YWQ1 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trbv23A0A0A6YWQ1 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv23A0A0A6YWQ1 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv23A0A0A6YWQ1 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC14.17□□□□□ -0.14
Trbv23A0A0A6YWQ1 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC14.17□□□□□ -0.14
Trbv23A0A0A6YWQ1 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv23A0A0A6YWQ1 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Trbv23A0A0A6YWQ1 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Trbv23A0A0A6YWQ1 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv23A0A0A6YWQ1 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv23A0A0A6YWQ1 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trbv23A0A0A6YWQ1 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv23A0A0A6YWQ1 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Trbv23A0A0A6YWQ1 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv23A0A0A6YWQ1 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv23A0A0A6YWQ1 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv23A0A0A6YWQ1 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv23A0A0A6YWQ1 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv23A0A0A6YWQ1 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv23A0A0A6YWQ1 Gm11643-201ENSMUST00000119578 864 ntBASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms