Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trav6-4A0A075B6B4 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-4A0A075B6B4 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-4A0A075B6B4 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-4A0A075B6B4 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-4A0A075B6B4 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-4A0A075B6B4 Gm8839-201ENSMUST00000121279 1645 ntBASIC12.69□□□□□ -0.38
Trav6-4A0A075B6B4 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-4A0A075B6B4 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trav6-4A0A075B6B4 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-4A0A075B6B4 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-4A0A075B6B4 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trav6-4A0A075B6B4 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trav6-4A0A075B6B4 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-4A0A075B6B4 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-4A0A075B6B4 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-4A0A075B6B4 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC12.68□□□□□ -0.38
Trav6-4A0A075B6B4 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-4A0A075B6B4 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav6-4A0A075B6B4 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-4A0A075B6B4 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-4A0A075B6B4 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-4A0A075B6B4 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav6-4A0A075B6B4 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Trav6-4A0A075B6B4 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-4A0A075B6B4 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-4A0A075B6B4 AC158538.1-201ENSMUST00000225870 294 ntBASIC12.68□□□□□ -0.38
Trav6-4A0A075B6B4 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-4A0A075B6B4 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
Trav6-4A0A075B6B4 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-4A0A075B6B4 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-4A0A075B6B4 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trav6-4A0A075B6B4 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-4A0A075B6B4 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-4A0A075B6B4 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-4A0A075B6B4 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trav6-4A0A075B6B4 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trav6-4A0A075B6B4 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-4A0A075B6B4 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trav6-4A0A075B6B4 Zfp264-201ENSMUST00000208656 1563 ntBASIC12.68□□□□□ -0.38
Trav6-4A0A075B6B4 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trav6-4A0A075B6B4 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-4A0A075B6B4 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-4A0A075B6B4 Gm36858-201ENSMUST00000194501 2391 ntBASIC12.67□□□□□ -0.38
Trav6-4A0A075B6B4 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-4A0A075B6B4 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-4A0A075B6B4 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-4A0A075B6B4 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-4A0A075B6B4 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-4A0A075B6B4 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trav6-4A0A075B6B4 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-4A0A075B6B4 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC12.67□□□□□ -0.38
Trav6-4A0A075B6B4 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Trav6-4A0A075B6B4 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trav6-4A0A075B6B4 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-4A0A075B6B4 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-4A0A075B6B4 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trav6-4A0A075B6B4 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC12.67□□□□□ -0.38
Trav6-4A0A075B6B4 Gm44450-201ENSMUST00000199528 114 ntBASIC12.67□□□□□ -0.38
Trav6-4A0A075B6B4 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-4A0A075B6B4 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-4A0A075B6B4 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC12.67□□□□□ -0.38
Trav6-4A0A075B6B4 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trav6-4A0A075B6B4 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-4A0A075B6B4 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trav6-4A0A075B6B4 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-4A0A075B6B4 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-4A0A075B6B4 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav6-4A0A075B6B4 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav6-4A0A075B6B4 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trav6-4A0A075B6B4 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trav6-4A0A075B6B4 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-4A0A075B6B4 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-4A0A075B6B4 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-4A0A075B6B4 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-4A0A075B6B4 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-4A0A075B6B4 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav6-4A0A075B6B4 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-4A0A075B6B4 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-4A0A075B6B4 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-4A0A075B6B4 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trav6-4A0A075B6B4 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trav6-4A0A075B6B4 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-4A0A075B6B4 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trav6-4A0A075B6B4 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-4A0A075B6B4 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-4A0A075B6B4 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-4A0A075B6B4 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-4A0A075B6B4 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Trav6-4A0A075B6B4 Gm29707-201ENSMUST00000196325 491 ntBASIC12.66□□□□□ -0.38
Trav6-4A0A075B6B4 Gm18421-201ENSMUST00000204122 625 ntBASIC12.66□□□□□ -0.38
Trav6-4A0A075B6B4 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-4A0A075B6B4 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-4A0A075B6B4 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-4A0A075B6B4 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav6-4A0A075B6B4 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-4A0A075B6B4 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav6-4A0A075B6B4 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-4A0A075B6B4 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trav6-4A0A075B6B4 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms