Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6n-6A0A075B6B2 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6n-6A0A075B6B2 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav6n-6A0A075B6B2 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6n-6A0A075B6B2 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Trav6n-6A0A075B6B2 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6n-6A0A075B6B2 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trav6n-6A0A075B6B2 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trav6n-6A0A075B6B2 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6n-6A0A075B6B2 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6n-6A0A075B6B2 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6n-6A0A075B6B2 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6n-6A0A075B6B2 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6n-6A0A075B6B2 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6n-6A0A075B6B2 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6n-6A0A075B6B2 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6n-6A0A075B6B2 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Trav6n-6A0A075B6B2 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trav6n-6A0A075B6B2 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6n-6A0A075B6B2 Gm10812-201ENSMUST00000099864 546 ntBASIC12.3□□□□□ -0.44
Trav6n-6A0A075B6B2 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6n-6A0A075B6B2 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6n-6A0A075B6B2 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6n-6A0A075B6B2 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6n-6A0A075B6B2 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Trav6n-6A0A075B6B2 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6n-6A0A075B6B2 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6n-6A0A075B6B2 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trav6n-6A0A075B6B2 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trav6n-6A0A075B6B2 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6n-6A0A075B6B2 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6n-6A0A075B6B2 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6n-6A0A075B6B2 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6n-6A0A075B6B2 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6n-6A0A075B6B2 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav6n-6A0A075B6B2 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Trav6n-6A0A075B6B2 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6n-6A0A075B6B2 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trav6n-6A0A075B6B2 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6n-6A0A075B6B2 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6n-6A0A075B6B2 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6n-6A0A075B6B2 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trav6n-6A0A075B6B2 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6n-6A0A075B6B2 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6n-6A0A075B6B2 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6n-6A0A075B6B2 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC12.29□□□□□ -0.44
Trav6n-6A0A075B6B2 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6n-6A0A075B6B2 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6n-6A0A075B6B2 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6n-6A0A075B6B2 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6n-6A0A075B6B2 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trav6n-6A0A075B6B2 Gm11643-201ENSMUST00000119578 864 ntBASIC12.29□□□□□ -0.44
Trav6n-6A0A075B6B2 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6n-6A0A075B6B2 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6n-6A0A075B6B2 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6n-6A0A075B6B2 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Trav6n-6A0A075B6B2 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6n-6A0A075B6B2 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6n-6A0A075B6B2 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6n-6A0A075B6B2 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trav6n-6A0A075B6B2 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6n-6A0A075B6B2 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6n-6A0A075B6B2 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6n-6A0A075B6B2 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6n-6A0A075B6B2 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav6n-6A0A075B6B2 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6n-6A0A075B6B2 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6n-6A0A075B6B2 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6n-6A0A075B6B2 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6n-6A0A075B6B2 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6n-6A0A075B6B2 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6n-6A0A075B6B2 Gm44616-201ENSMUST00000206417 1732 ntBASIC12.28□□□□□ -0.44
Trav6n-6A0A075B6B2 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6n-6A0A075B6B2 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6n-6A0A075B6B2 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6n-6A0A075B6B2 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6n-6A0A075B6B2 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trav6n-6A0A075B6B2 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6n-6A0A075B6B2 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6n-6A0A075B6B2 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6n-6A0A075B6B2 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6n-6A0A075B6B2 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6n-6A0A075B6B2 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trav6n-6A0A075B6B2 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC12.28□□□□□ -0.44
Trav6n-6A0A075B6B2 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6n-6A0A075B6B2 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6n-6A0A075B6B2 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6n-6A0A075B6B2 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6n-6A0A075B6B2 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6n-6A0A075B6B2 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6n-6A0A075B6B2 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6n-6A0A075B6B2 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6n-6A0A075B6B2 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav6n-6A0A075B6B2 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav6n-6A0A075B6B2 Gm45560-201ENSMUST00000211492 1472 ntBASIC12.27□□□□□ -0.44
Trav6n-6A0A075B6B2 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav6n-6A0A075B6B2 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav6n-6A0A075B6B2 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Trav6n-6A0A075B6B2 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav6n-6A0A075B6B2 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms