Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav17A0A075B655 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav17A0A075B655 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav17A0A075B655 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav17A0A075B655 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav17A0A075B655 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav17A0A075B655 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav17A0A075B655 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav17A0A075B655 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav17A0A075B655 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC13.12□□□□□ -0.31
Trav17A0A075B655 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav17A0A075B655 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav17A0A075B655 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav17A0A075B655 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Trav17A0A075B655 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav17A0A075B655 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav17A0A075B655 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav17A0A075B655 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav17A0A075B655 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav17A0A075B655 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav17A0A075B655 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Trav17A0A075B655 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
Trav17A0A075B655 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav17A0A075B655 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav17A0A075B655 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav17A0A075B655 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav17A0A075B655 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav17A0A075B655 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav17A0A075B655 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav17A0A075B655 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav17A0A075B655 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav17A0A075B655 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav17A0A075B655 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav17A0A075B655 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trav17A0A075B655 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav17A0A075B655 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav17A0A075B655 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav17A0A075B655 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav17A0A075B655 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav17A0A075B655 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav17A0A075B655 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav17A0A075B655 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav17A0A075B655 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav17A0A075B655 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav17A0A075B655 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC13.11□□□□□ -0.31
Trav17A0A075B655 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC13.11□□□□□ -0.31
Trav17A0A075B655 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav17A0A075B655 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Trav17A0A075B655 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav17A0A075B655 Gm27000-201ENSMUST00000182943 842 ntBASIC13.11□□□□□ -0.31
Trav17A0A075B655 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC13.11□□□□□ -0.31
Trav17A0A075B655 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav17A0A075B655 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav17A0A075B655 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav17A0A075B655 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav17A0A075B655 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav17A0A075B655 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav17A0A075B655 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trav17A0A075B655 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trav17A0A075B655 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav17A0A075B655 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav17A0A075B655 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav17A0A075B655 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trav17A0A075B655 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav17A0A075B655 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav17A0A075B655 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav17A0A075B655 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav17A0A075B655 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav17A0A075B655 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
Trav17A0A075B655 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trav17A0A075B655 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trav17A0A075B655 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav17A0A075B655 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC13.1□□□□□ -0.31
Trav17A0A075B655 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC13.1□□□□□ -0.31
Trav17A0A075B655 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC13.1□□□□□ -0.31
Trav17A0A075B655 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav17A0A075B655 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav17A0A075B655 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trav17A0A075B655 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav17A0A075B655 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trav17A0A075B655 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Trav17A0A075B655 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav17A0A075B655 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav17A0A075B655 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav17A0A075B655 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav17A0A075B655 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav17A0A075B655 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav17A0A075B655 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav17A0A075B655 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav17A0A075B655 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav17A0A075B655 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav17A0A075B655 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav17A0A075B655 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav17A0A075B655 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav17A0A075B655 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav17A0A075B655 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav17A0A075B655 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav17A0A075B655 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav17A0A075B655 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC13.09□□□□□ -0.31
Trav17A0A075B655 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms