Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13-1A0A075B644 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13-1A0A075B644 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13-1A0A075B644 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC11.74□□□□□ -0.53
Trav13-1A0A075B644 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13-1A0A075B644 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13-1A0A075B644 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Trav13-1A0A075B644 Gm10819-201ENSMUST00000099988 561 ntBASIC11.74□□□□□ -0.53
Trav13-1A0A075B644 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trav13-1A0A075B644 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13-1A0A075B644 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13-1A0A075B644 AC154855.1-201ENSMUST00000227353 1458 ntBASIC11.74□□□□□ -0.53
Trav13-1A0A075B644 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Trav13-1A0A075B644 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13-1A0A075B644 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13-1A0A075B644 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13-1A0A075B644 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13-1A0A075B644 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13-1A0A075B644 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13-1A0A075B644 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trav13-1A0A075B644 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13-1A0A075B644 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13-1A0A075B644 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav13-1A0A075B644 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13-1A0A075B644 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav13-1A0A075B644 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trav13-1A0A075B644 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13-1A0A075B644 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13-1A0A075B644 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13-1A0A075B644 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13-1A0A075B644 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13-1A0A075B644 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Trav13-1A0A075B644 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13-1A0A075B644 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Trav13-1A0A075B644 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Trav13-1A0A075B644 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13-1A0A075B644 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC11.73□□□□□ -0.53
Trav13-1A0A075B644 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13-1A0A075B644 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13-1A0A075B644 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trav13-1A0A075B644 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC11.73□□□□□ -0.53
Trav13-1A0A075B644 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC11.73□□□□□ -0.53
Trav13-1A0A075B644 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13-1A0A075B644 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC11.73□□□□□ -0.53
Trav13-1A0A075B644 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13-1A0A075B644 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13-1A0A075B644 Actl10-202ENSMUST00000226583 1501 ntBASIC11.73□□□□□ -0.53
Trav13-1A0A075B644 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13-1A0A075B644 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC11.73□□□□□ -0.53
Trav13-1A0A075B644 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13-1A0A075B644 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13-1A0A075B644 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13-1A0A075B644 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC11.73□□□□□ -0.53
Trav13-1A0A075B644 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13-1A0A075B644 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trav13-1A0A075B644 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC11.72□□□□□ -0.53
Trav13-1A0A075B644 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trav13-1A0A075B644 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trav13-1A0A075B644 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trav13-1A0A075B644 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13-1A0A075B644 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13-1A0A075B644 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13-1A0A075B644 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13-1A0A075B644 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13-1A0A075B644 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13-1A0A075B644 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13-1A0A075B644 Gm27000-201ENSMUST00000182943 842 ntBASIC11.72□□□□□ -0.53
Trav13-1A0A075B644 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC11.72□□□□□ -0.53
Trav13-1A0A075B644 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trav13-1A0A075B644 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Trav13-1A0A075B644 AC122351.1-201ENSMUST00000220467 126 ntBASIC11.72□□□□□ -0.53
Trav13-1A0A075B644 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13-1A0A075B644 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13-1A0A075B644 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13-1A0A075B644 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13-1A0A075B644 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13-1A0A075B644 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC11.72□□□□□ -0.53
Trav13-1A0A075B644 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC11.72□□□□□ -0.53
Trav13-1A0A075B644 Gm43808-201ENSMUST00000202534 2065 ntBASIC11.72□□□□□ -0.53
Trav13-1A0A075B644 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trav13-1A0A075B644 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13-1A0A075B644 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13-1A0A075B644 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13-1A0A075B644 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13-1A0A075B644 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13-1A0A075B644 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13-1A0A075B644 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trav13-1A0A075B644 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13-1A0A075B644 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13-1A0A075B644 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Trav13-1A0A075B644 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13-1A0A075B644 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13-1A0A075B644 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13-1A0A075B644 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13-1A0A075B644 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13-1A0A075B644 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13-1A0A075B644 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13-1A0A075B644 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13-1A0A075B644 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC11.71□□□□□ -0.53
Trav13-1A0A075B644 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms