Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav16d-dv11A0A075B617 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav16d-dv11A0A075B617 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav16d-dv11A0A075B617 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav16d-dv11A0A075B617 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trav16d-dv11A0A075B617 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.15□□□□□ -0.46
Trav16d-dv11A0A075B617 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav16d-dv11A0A075B617 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav16d-dv11A0A075B617 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav16d-dv11A0A075B617 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav16d-dv11A0A075B617 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav16d-dv11A0A075B617 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav16d-dv11A0A075B617 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav16d-dv11A0A075B617 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav16d-dv11A0A075B617 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav16d-dv11A0A075B617 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC12.15□□□□□ -0.46
Trav16d-dv11A0A075B617 AC153526.5-201ENSMUST00000218661 2147 ntBASIC12.15□□□□□ -0.46
Trav16d-dv11A0A075B617 Wnt10b-205ENSMUST00000226846 1204 ntBASIC12.15□□□□□ -0.46
Trav16d-dv11A0A075B617 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Trav16d-dv11A0A075B617 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav16d-dv11A0A075B617 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav16d-dv11A0A075B617 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav16d-dv11A0A075B617 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
Trav16d-dv11A0A075B617 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav16d-dv11A0A075B617 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav16d-dv11A0A075B617 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav16d-dv11A0A075B617 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav16d-dv11A0A075B617 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav16d-dv11A0A075B617 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav16d-dv11A0A075B617 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav16d-dv11A0A075B617 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav16d-dv11A0A075B617 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav16d-dv11A0A075B617 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav16d-dv11A0A075B617 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav16d-dv11A0A075B617 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav16d-dv11A0A075B617 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav16d-dv11A0A075B617 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav16d-dv11A0A075B617 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Trav16d-dv11A0A075B617 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav16d-dv11A0A075B617 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav16d-dv11A0A075B617 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav16d-dv11A0A075B617 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav16d-dv11A0A075B617 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav16d-dv11A0A075B617 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trav16d-dv11A0A075B617 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav16d-dv11A0A075B617 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC12.14□□□□□ -0.47
Trav16d-dv11A0A075B617 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav16d-dv11A0A075B617 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC12.14□□□□□ -0.47
Trav16d-dv11A0A075B617 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Trav16d-dv11A0A075B617 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav16d-dv11A0A075B617 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.14□□□□□ -0.47
Trav16d-dv11A0A075B617 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav16d-dv11A0A075B617 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trav16d-dv11A0A075B617 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav16d-dv11A0A075B617 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav16d-dv11A0A075B617 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav16d-dv11A0A075B617 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav16d-dv11A0A075B617 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav16d-dv11A0A075B617 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav16d-dv11A0A075B617 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trav16d-dv11A0A075B617 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav16d-dv11A0A075B617 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav16d-dv11A0A075B617 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trav16d-dv11A0A075B617 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav16d-dv11A0A075B617 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav16d-dv11A0A075B617 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav16d-dv11A0A075B617 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC12.13□□□□□ -0.47
Trav16d-dv11A0A075B617 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav16d-dv11A0A075B617 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav16d-dv11A0A075B617 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav16d-dv11A0A075B617 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Trav16d-dv11A0A075B617 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trav16d-dv11A0A075B617 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav16d-dv11A0A075B617 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Trav16d-dv11A0A075B617 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav16d-dv11A0A075B617 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav16d-dv11A0A075B617 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav16d-dv11A0A075B617 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trav16d-dv11A0A075B617 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC12.13□□□□□ -0.47
Trav16d-dv11A0A075B617 Gm7514-201ENSMUST00000209475 934 ntBASIC12.13□□□□□ -0.47
Trav16d-dv11A0A075B617 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav16d-dv11A0A075B617 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav16d-dv11A0A075B617 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav16d-dv11A0A075B617 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav16d-dv11A0A075B617 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav16d-dv11A0A075B617 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav16d-dv11A0A075B617 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trav16d-dv11A0A075B617 AC115863.1-201ENSMUST00000214815 1813 ntBASIC12.13□□□□□ -0.47
Trav16d-dv11A0A075B617 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav16d-dv11A0A075B617 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav16d-dv11A0A075B617 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav16d-dv11A0A075B617 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trav16d-dv11A0A075B617 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav16d-dv11A0A075B617 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav16d-dv11A0A075B617 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav16d-dv11A0A075B617 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav16d-dv11A0A075B617 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC12.12□□□□□ -0.47
Trav16d-dv11A0A075B617 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav16d-dv11A0A075B617 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav16d-dv11A0A075B617 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms