Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC12.11□□□□□ -0.47
Trav13d-1A0A075B606 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13d-1A0A075B606 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13d-1A0A075B606 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trav13d-1A0A075B606 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13d-1A0A075B606 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13d-1A0A075B606 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13d-1A0A075B606 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13d-1A0A075B606 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13d-1A0A075B606 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13d-1A0A075B606 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13d-1A0A075B606 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13d-1A0A075B606 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13d-1A0A075B606 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13d-1A0A075B606 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13d-1A0A075B606 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Trav13d-1A0A075B606 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13d-1A0A075B606 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13d-1A0A075B606 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13d-1A0A075B606 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13d-1A0A075B606 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC12.1□□□□□ -0.47
Trav13d-1A0A075B606 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13d-1A0A075B606 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13d-1A0A075B606 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trav13d-1A0A075B606 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Trav13d-1A0A075B606 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trav13d-1A0A075B606 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13d-1A0A075B606 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav13d-1A0A075B606 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13d-1A0A075B606 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13d-1A0A075B606 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trav13d-1A0A075B606 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13d-1A0A075B606 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13d-1A0A075B606 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13d-1A0A075B606 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13d-1A0A075B606 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Trav13d-1A0A075B606 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13d-1A0A075B606 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13d-1A0A075B606 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trav13d-1A0A075B606 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13d-1A0A075B606 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13d-1A0A075B606 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trav13d-1A0A075B606 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trav13d-1A0A075B606 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Trav13d-1A0A075B606 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav13d-1A0A075B606 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13d-1A0A075B606 Gm28265-201ENSMUST00000188201 2319 ntBASIC12.09□□□□□ -0.47
Trav13d-1A0A075B606 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13d-1A0A075B606 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13d-1A0A075B606 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13d-1A0A075B606 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Trav13d-1A0A075B606 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13d-1A0A075B606 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13d-1A0A075B606 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC12.09□□□□□ -0.47
Trav13d-1A0A075B606 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13d-1A0A075B606 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13d-1A0A075B606 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav13d-1A0A075B606 AC125311.2-201ENSMUST00000227477 1940 ntBASIC12.09□□□□□ -0.47
Trav13d-1A0A075B606 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13d-1A0A075B606 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13d-1A0A075B606 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav13d-1A0A075B606 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13d-1A0A075B606 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13d-1A0A075B606 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13d-1A0A075B606 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13d-1A0A075B606 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13d-1A0A075B606 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13d-1A0A075B606 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13d-1A0A075B606 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13d-1A0A075B606 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13d-1A0A075B606 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav13d-1A0A075B606 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13d-1A0A075B606 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13d-1A0A075B606 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13d-1A0A075B606 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13d-1A0A075B606 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Trav13d-1A0A075B606 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13d-1A0A075B606 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13d-1A0A075B606 Actl10-202ENSMUST00000226583 1501 ntBASIC12.08□□□□□ -0.48
Trav13d-1A0A075B606 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC12.08□□□□□ -0.48
Trav13d-1A0A075B606 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Trav13d-1A0A075B606 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav13d-1A0A075B606 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC12.08□□□□□ -0.48
Trav13d-1A0A075B606 Gm17808-201ENSMUST00000200859 894 ntBASIC12.08□□□□□ -0.48
Trav13d-1A0A075B606 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC12.08□□□□□ -0.48
Trav13d-1A0A075B606 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trav13d-1A0A075B606 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13d-1A0A075B606 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13d-1A0A075B606 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13d-1A0A075B606 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13d-1A0A075B606 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13d-1A0A075B606 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13d-1A0A075B606 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13d-1A0A075B606 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trav13d-1A0A075B606 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13d-1A0A075B606 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trav13d-1A0A075B606 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13d-1A0A075B606 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Trav13d-1A0A075B606 Cxcl14-202ENSMUST00000224801 1467 ntBASIC12.08□□□□□ -0.48
Trav13d-1A0A075B606 AC154855.1-201ENSMUST00000227353 1458 ntBASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms