Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.14□□□□□ -0.15
Trav5-1A0A075B5Z7 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC14.14□□□□□ -0.15
Trav5-1A0A075B5Z7 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav5-1A0A075B5Z7 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC14.14□□□□□ -0.15
Trav5-1A0A075B5Z7 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav5-1A0A075B5Z7 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav5-1A0A075B5Z7 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trav5-1A0A075B5Z7 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trav5-1A0A075B5Z7 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav5-1A0A075B5Z7 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Trav5-1A0A075B5Z7 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav5-1A0A075B5Z7 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav5-1A0A075B5Z7 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav5-1A0A075B5Z7 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.13□□□□□ -0.15
Trav5-1A0A075B5Z7 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Trav5-1A0A075B5Z7 Gm13312-201ENSMUST00000119631 718 ntBASIC14.13□□□□□ -0.15
Trav5-1A0A075B5Z7 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav5-1A0A075B5Z7 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trav5-1A0A075B5Z7 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav5-1A0A075B5Z7 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.13□□□□□ -0.15
Trav5-1A0A075B5Z7 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.13□□□□□ -0.15
Trav5-1A0A075B5Z7 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav5-1A0A075B5Z7 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav5-1A0A075B5Z7 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav5-1A0A075B5Z7 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trav5-1A0A075B5Z7 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav5-1A0A075B5Z7 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trav5-1A0A075B5Z7 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5-1A0A075B5Z7 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.12□□□□□ -0.15
Trav5-1A0A075B5Z7 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5-1A0A075B5Z7 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Trav5-1A0A075B5Z7 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5-1A0A075B5Z7 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5-1A0A075B5Z7 Gm5898-201ENSMUST00000121016 2071 ntBASIC14.12□□□□□ -0.15
Trav5-1A0A075B5Z7 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5-1A0A075B5Z7 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trav5-1A0A075B5Z7 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5-1A0A075B5Z7 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5-1A0A075B5Z7 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5-1A0A075B5Z7 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5-1A0A075B5Z7 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5-1A0A075B5Z7 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5-1A0A075B5Z7 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5-1A0A075B5Z7 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5-1A0A075B5Z7 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5-1A0A075B5Z7 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Trav5-1A0A075B5Z7 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5-1A0A075B5Z7 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5-1A0A075B5Z7 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5-1A0A075B5Z7 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5-1A0A075B5Z7 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5-1A0A075B5Z7 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5-1A0A075B5Z7 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5-1A0A075B5Z7 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trav5-1A0A075B5Z7 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5-1A0A075B5Z7 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5-1A0A075B5Z7 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5-1A0A075B5Z7 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5-1A0A075B5Z7 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5-1A0A075B5Z7 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5-1A0A075B5Z7 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC14.12□□□□□ -0.15
Trav5-1A0A075B5Z7 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav5-1A0A075B5Z7 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav5-1A0A075B5Z7 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav5-1A0A075B5Z7 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav5-1A0A075B5Z7 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav5-1A0A075B5Z7 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav5-1A0A075B5Z7 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav5-1A0A075B5Z7 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trav5-1A0A075B5Z7 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav5-1A0A075B5Z7 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav5-1A0A075B5Z7 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav5-1A0A075B5Z7 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trav5-1A0A075B5Z7 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.11□□□□□ -0.15
Trav5-1A0A075B5Z7 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav5-1A0A075B5Z7 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav5-1A0A075B5Z7 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav5-1A0A075B5Z7 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Trav5-1A0A075B5Z7 Gm28033-201ENSMUST00000184224 96 ntBASIC14.11□□□□□ -0.15
Trav5-1A0A075B5Z7 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav5-1A0A075B5Z7 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav5-1A0A075B5Z7 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav5-1A0A075B5Z7 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav5-1A0A075B5Z7 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav5-1A0A075B5Z7 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav5-1A0A075B5Z7 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav5-1A0A075B5Z7 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav5-1A0A075B5Z7 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav5-1A0A075B5Z7 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav5-1A0A075B5Z7 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav5-1A0A075B5Z7 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav5-1A0A075B5Z7 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trav5-1A0A075B5Z7 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Trav5-1A0A075B5Z7 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.1□□□□□ -0.15
Trav5-1A0A075B5Z7 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav5-1A0A075B5Z7 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav5-1A0A075B5Z7 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav5-1A0A075B5Z7 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Trav5-1A0A075B5Z7 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.1□□□□□ -0.15
Trav5-1A0A075B5Z7 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms