Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.87□□□□□ -1.79
CCDC65Q8IXS2 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC3.87□□□□□ -1.79
CCDC65Q8IXS2 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC65Q8IXS2 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC3.87□□□□□ -1.79
CCDC65Q8IXS2 AC009093.8-201ENST00000641769 292 ntBASIC3.87□□□□□ -1.79
CCDC65Q8IXS2 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC65Q8IXS2 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
CCDC65Q8IXS2 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC65Q8IXS2 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.86□□□□□ -1.79
CCDC65Q8IXS2 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC65Q8IXS2 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
CCDC65Q8IXS2 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
CCDC65Q8IXS2 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC65Q8IXS2 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC65Q8IXS2 RNA5SP189-201ENST00000364920 115 ntBASIC3.86□□□□□ -1.79
CCDC65Q8IXS2 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.86□□□□□ -1.79
CCDC65Q8IXS2 HMGB3P18-201ENST00000406327 590 ntBASIC3.86□□□□□ -1.79
CCDC65Q8IXS2 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.86□□□□□ -1.79
CCDC65Q8IXS2 AL691517.1-201ENST00000440833 1235 ntBASIC3.86□□□□□ -1.79
CCDC65Q8IXS2 MTCO3P43-201ENST00000440974 771 ntBASIC3.86□□□□□ -1.79
CCDC65Q8IXS2 AC239367.2-201ENST00000447309 705 ntBASIC3.86□□□□□ -1.79
CCDC65Q8IXS2 AL500527.1-201ENST00000448532 255 ntBASIC3.86□□□□□ -1.79
CCDC65Q8IXS2 PTGES3P5-201ENST00000455109 434 ntBASIC3.86□□□□□ -1.79
CCDC65Q8IXS2 AC007967.1-201ENST00000455422 1159 ntBASIC3.86□□□□□ -1.79
CCDC65Q8IXS2 U3.44-201ENST00000458938 192 ntBASIC3.86□□□□□ -1.79
CCDC65Q8IXS2 CABYRP1-201ENST00000465493 1045 ntBASIC3.86□□□□□ -1.79
CCDC65Q8IXS2 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.86□□□□□ -1.79
CCDC65Q8IXS2 AC106707.2-201ENST00000484182 374 ntBASIC3.86□□□□□ -1.79
CCDC65Q8IXS2 OR9N1P-202ENST00000494289 481 ntBASIC3.86□□□□□ -1.79
CCDC65Q8IXS2 PCBP2P3-201ENST00000509726 843 ntBASIC3.86□□□□□ -1.79
CCDC65Q8IXS2 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.86□□□□□ -1.79
CCDC65Q8IXS2 AC103843.2-201ENST00000530523 682 ntBASIC3.86□□□□□ -1.79
CCDC65Q8IXS2 TGIF1P1-201ENST00000558095 802 ntBASIC3.86□□□□□ -1.79
CCDC65Q8IXS2 AL731537.2-201ENST00000561565 951 ntBASIC3.86□□□□□ -1.79
CCDC65Q8IXS2 MTND4LP24-201ENST00000572277 291 ntBASIC3.86□□□□□ -1.79
CCDC65Q8IXS2 AC011492.1-201ENST00000600023 315 ntBASIC3.86□□□□□ -1.79
CCDC65Q8IXS2 AC012467.1-201ENST00000607740 256 ntBASIC3.86□□□□□ -1.79
CCDC65Q8IXS2 AL355816.1-201ENST00000607951 118 ntBASIC3.86□□□□□ -1.79
CCDC65Q8IXS2 AC110792.4-201ENST00000609843 298 ntBASIC3.86□□□□□ -1.79
CCDC65Q8IXS2 AC039056.2-201ENST00000622261 511 ntBASIC3.86□□□□□ -1.79
CCDC65Q8IXS2 AL034408.1-202ENST00000636088 415 ntBASIC3.86□□□□□ -1.79
CCDC65Q8IXS2 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.86□□□□□ -1.79
CCDC65Q8IXS2 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC65Q8IXS2 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
CCDC65Q8IXS2 AL365440.1-201ENST00000436135 2167 ntBASIC3.86□□□□□ -1.79
CCDC65Q8IXS2 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
CCDC65Q8IXS2 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
CCDC65Q8IXS2 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.85□□□□□ -1.79
CCDC65Q8IXS2 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC65Q8IXS2 RNU6-252P-201ENST00000363232 107 ntBASIC3.85□□□□□ -1.79
CCDC65Q8IXS2 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC65Q8IXS2 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC65Q8IXS2 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC65Q8IXS2 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC65Q8IXS2 AC017079.2-201ENST00000416102 485 ntBASIC3.85□□□□□ -1.79
CCDC65Q8IXS2 LINC01881-201ENST00000416103 412 ntBASIC3.85□□□□□ -1.79
CCDC65Q8IXS2 LINC01347-201ENST00000417964 355 ntBASIC3.85□□□□□ -1.79
CCDC65Q8IXS2 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.85□□□□□ -1.79
CCDC65Q8IXS2 NEK4P1-201ENST00000433383 879 ntBASIC3.85□□□□□ -1.79
CCDC65Q8IXS2 AL031663.1-201ENST00000437445 219 ntBASIC3.85□□□□□ -1.79
CCDC65Q8IXS2 BTBD7P2-201ENST00000441962 620 ntBASIC3.85□□□□□ -1.79
CCDC65Q8IXS2 MTND2P6-201ENST00000455337 1030 ntBASIC3.85□□□□□ -1.79
CCDC65Q8IXS2 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.85□□□□□ -1.79
CCDC65Q8IXS2 AP002884.2-201ENST00000471647 395 ntBASIC3.85□□□□□ -1.79
CCDC65Q8IXS2 RPL23AP44-201ENST00000482216 473 ntBASIC3.85□□□□□ -1.79
CCDC65Q8IXS2 AC093663.2-201ENST00000484625 313 ntBASIC3.85□□□□□ -1.79
CCDC65Q8IXS2 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC65Q8IXS2 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.85□□□□□ -1.79
CCDC65Q8IXS2 AC002456.2-201ENST00000509356 380 ntBASIC3.85□□□□□ -1.79
CCDC65Q8IXS2 PHBP14-201ENST00000512887 367 ntBASIC3.85□□□□□ -1.79
CCDC65Q8IXS2 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.85□□□□□ -1.79
CCDC65Q8IXS2 RN7SKP13-201ENST00000515933 244 ntBASIC3.85□□□□□ -1.79
CCDC65Q8IXS2 SNORA31.13-201ENST00000516624 135 ntBASIC3.85□□□□□ -1.79
CCDC65Q8IXS2 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.85□□□□□ -1.79
CCDC65Q8IXS2 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC3.85□□□□□ -1.79
CCDC65Q8IXS2 MED28P5-201ENST00000528254 438 ntBASIC3.85□□□□□ -1.79
CCDC65Q8IXS2 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC3.85□□□□□ -1.79
CCDC65Q8IXS2 UBE2NP1-201ENST00000545592 458 ntBASIC3.85□□□□□ -1.79
CCDC65Q8IXS2 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.85□□□□□ -1.79
CCDC65Q8IXS2 AC106785.3-201ENST00000564064 847 ntBASIC3.85□□□□□ -1.79
CCDC65Q8IXS2 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.85□□□□□ -1.79
CCDC65Q8IXS2 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.85□□□□□ -1.79
CCDC65Q8IXS2 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.85□□□□□ -1.79
CCDC65Q8IXS2 AC115085.1-201ENST00000588924 229 ntBASIC3.85□□□□□ -1.79
CCDC65Q8IXS2 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC3.85□□□□□ -1.79
CCDC65Q8IXS2 AC040174.2-201ENST00000602701 465 ntBASIC3.85□□□□□ -1.79
CCDC65Q8IXS2 AC135178.6-201ENST00000605314 398 ntBASIC3.85□□□□□ -1.79
CCDC65Q8IXS2 AC011374.2-201ENST00000607135 526 ntBASIC3.85□□□□□ -1.79
CCDC65Q8IXS2 AC018754.1-201ENST00000607486 925 ntBASIC3.85□□□□□ -1.79
CCDC65Q8IXS2 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.85□□□□□ -1.79
CCDC65Q8IXS2 AC090617.9-201ENST00000623751 147 ntBASIC3.85□□□□□ -1.79
CCDC65Q8IXS2 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC65Q8IXS2 MTND4P21-201ENST00000453886 1357 ntBASIC3.85□□□□□ -1.79
CCDC65Q8IXS2 AC118273.1-201ENST00000525324 3006 ntBASIC3.85□□□□□ -1.79
CCDC65Q8IXS2 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC65Q8IXS2 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
CCDC65Q8IXS2 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
CCDC65Q8IXS2 RAD1P1-201ENST00000231383 813 ntBASIC3.84□□□□□ -1.79
CCDC65Q8IXS2 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
CCDC65Q8IXS2 AL589826.1-201ENST00000340697 249 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms