Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 U6.105-201ENST00000637379 88 ntBASIC3.03□□□□□ -1.92
H3F3AP84243 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.03□□□□□ -1.92
H3F3AP84243 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
H3F3AP84243 CR383658.2-201ENST00000547576 1525 ntBASIC3.03□□□□□ -1.92
H3F3AP84243 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.03□□□□□ -1.92
H3F3AP84243 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.03□□□□□ -1.93
H3F3AP84243 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
H3F3AP84243 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
H3F3AP84243 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
H3F3AP84243 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
H3F3AP84243 RNU1-75P-201ENST00000347264 129 ntBASIC3.02□□□□□ -1.93
H3F3AP84243 RNA5SP50-201ENST00000363731 107 ntBASIC3.02□□□□□ -1.93
H3F3AP84243 RNU1-33P-201ENST00000364249 162 ntBASIC3.02□□□□□ -1.93
H3F3AP84243 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.02□□□□□ -1.93
H3F3AP84243 RNU6-317P-201ENST00000384031 107 ntBASIC3.02□□□□□ -1.93
H3F3AP84243 SNORA70E-201ENST00000384492 135 ntBASIC3.02□□□□□ -1.93
H3F3AP84243 RNU6-55P-201ENST00000411092 107 ntBASIC3.02□□□□□ -1.93
H3F3AP84243 RNU6-954P-201ENST00000411355 107 ntBASIC3.02□□□□□ -1.93
H3F3AP84243 RANP4-201ENST00000413361 655 ntBASIC3.02□□□□□ -1.93
H3F3AP84243 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.02□□□□□ -1.93
H3F3AP84243 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.02□□□□□ -1.93
H3F3AP84243 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.02□□□□□ -1.93
H3F3AP84243 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC3.02□□□□□ -1.93
H3F3AP84243 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC3.02□□□□□ -1.93
H3F3AP84243 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.02□□□□□ -1.93
H3F3AP84243 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.02□□□□□ -1.93
H3F3AP84243 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.02□□□□□ -1.93
H3F3AP84243 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.02□□□□□ -1.93
H3F3AP84243 DUXAP2-201ENST00000519198 589 ntBASIC3.02□□□□□ -1.93
H3F3AP84243 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.02□□□□□ -1.93
H3F3AP84243 UBE2NP1-201ENST00000545592 458 ntBASIC3.02□□□□□ -1.93
H3F3AP84243 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.02□□□□□ -1.93
H3F3AP84243 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.02□□□□□ -1.93
H3F3AP84243 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.02□□□□□ -1.93
H3F3AP84243 MIR1254-2-201ENST00000579553 63 ntBASIC3.02□□□□□ -1.93
H3F3AP84243 AL356321.1-201ENST00000621360 228 ntBASIC3.02□□□□□ -1.93
H3F3AP84243 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.02□□□□□ -1.93
H3F3AP84243 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.02□□□□□ -1.93
H3F3AP84243 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.02□□□□□ -1.93
H3F3AP84243 AC091152.2-201ENST00000591628 2569 ntBASIC3.02□□□□□ -1.93
H3F3AP84243 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.01□□□□□ -1.93
H3F3AP84243 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
H3F3AP84243 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
H3F3AP84243 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
H3F3AP84243 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.01□□□□□ -1.93
H3F3AP84243 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
H3F3AP84243 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
H3F3AP84243 MIR30E-201ENST00000362104 92 ntBASIC3.01□□□□□ -1.93
H3F3AP84243 OR6K3-202ENST00000368146 996 ntBASIC3.01□□□□□ -1.93
H3F3AP84243 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
H3F3AP84243 SNORA11-201ENST00000408789 128 ntBASIC3.01□□□□□ -1.93
H3F3AP84243 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.01□□□□□ -1.93
H3F3AP84243 AC126124.2-201ENST00000413542 321 ntBASIC3.01□□□□□ -1.93
H3F3AP84243 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.01□□□□□ -1.93
H3F3AP84243 RPL23AP82-202ENST00000427528 469 ntBASIC3.01□□□□□ -1.93
H3F3AP84243 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.01□□□□□ -1.93
H3F3AP84243 AC005019.1-201ENST00000436455 431 ntBASIC3.01□□□□□ -1.93
H3F3AP84243 ARL5AP2-201ENST00000444698 533 ntBASIC3.01□□□□□ -1.93
H3F3AP84243 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.01□□□□□ -1.93
H3F3AP84243 MRPS31P2-201ENST00000451581 518 ntBASIC3.01□□□□□ -1.93
H3F3AP84243 OR7L1P-201ENST00000456181 380 ntBASIC3.01□□□□□ -1.93
H3F3AP84243 AC010401.1-201ENST00000463867 348 ntBASIC3.01□□□□□ -1.93
H3F3AP84243 CENPBD1P1-201ENST00000464061 469 ntBASIC3.01□□□□□ -1.93
H3F3AP84243 AC008155.2-201ENST00000464337 397 ntBASIC3.01□□□□□ -1.93
H3F3AP84243 PLGLA-201ENST00000465668 449 ntBASIC3.01□□□□□ -1.93
H3F3AP84243 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.01□□□□□ -1.93
H3F3AP84243 SEC11B-201ENST00000518383 499 ntBASIC3.01□□□□□ -1.93
H3F3AP84243 AC107934.2-201ENST00000518653 310 ntBASIC3.01□□□□□ -1.93
H3F3AP84243 AC011602.1-201ENST00000546484 331 ntBASIC3.01□□□□□ -1.93
H3F3AP84243 AL845331.3-202ENST00000562856 261 ntBASIC3.01□□□□□ -1.93
H3F3AP84243 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.01□□□□□ -1.93
H3F3AP84243 AC037471.2-201ENST00000564941 598 ntBASIC3.01□□□□□ -1.93
H3F3AP84243 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.01□□□□□ -1.93
H3F3AP84243 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.01□□□□□ -1.93
H3F3AP84243 AP000919.1-202ENST00000581139 1264 ntBASIC3.01□□□□□ -1.93
H3F3AP84243 AC010928.3-201ENST00000587712 541 ntBASIC3.01□□□□□ -1.93
H3F3AP84243 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.01□□□□□ -1.93
H3F3AP84243 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.01□□□□□ -1.93
H3F3AP84243 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
H3F3AP84243 MTND5P27-201ENST00000428871 1720 ntBASIC3.01□□□□□ -1.93
H3F3AP84243 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
H3F3AP84243 AL157700.1-201ENST00000561973 1432 ntBASIC3.01□□□□□ -1.93
H3F3AP84243 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
H3F3AP84243 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
H3F3AP84243 SKINT1L-201ENST00000401057 817 ntBASIC3□□□□□ -1.93
H3F3AP84243 MTND2P16-201ENST00000419987 799 ntBASIC3□□□□□ -1.93
H3F3AP84243 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3□□□□□ -1.93
H3F3AP84243 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3□□□□□ -1.93
H3F3AP84243 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3□□□□□ -1.93
H3F3AP84243 AC097713.2-201ENST00000430199 356 ntBASIC3□□□□□ -1.93
H3F3AP84243 RPS24P8-201ENST00000431490 402 ntBASIC3□□□□□ -1.93
H3F3AP84243 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3□□□□□ -1.93
H3F3AP84243 ATP5C1P1-201ENST00000441945 895 ntBASIC3□□□□□ -1.93
H3F3AP84243 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3□□□□□ -1.93
H3F3AP84243 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3□□□□□ -1.93
H3F3AP84243 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC3□□□□□ -1.93
H3F3AP84243 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3□□□□□ -1.93
H3F3AP84243 AC125238.1-201ENST00000448842 249 ntBASIC3□□□□□ -1.93
H3F3AP84243 CYCSP35-201ENST00000451978 304 ntBASIC3□□□□□ -1.93
H3F3AP84243 AC104629.2-201ENST00000468627 598 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms