Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.07□□□□□ -1.92
ACTBP60709 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.07□□□□□ -1.92
ACTBP60709 CYCSP30-201ENST00000546447 172 ntBASIC3.07□□□□□ -1.92
ACTBP60709 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.07□□□□□ -1.92
ACTBP60709 AC012182.1-201ENST00000570133 895 ntBASIC3.07□□□□□ -1.92
ACTBP60709 AC005951.1-201ENST00000576706 485 ntBASIC3.07□□□□□ -1.92
ACTBP60709 AC053481.4-201ENST00000583164 216 ntBASIC3.07□□□□□ -1.92
ACTBP60709 AL133393.1-201ENST00000603277 287 ntBASIC3.07□□□□□ -1.92
ACTBP60709 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
ACTBP60709 AC068831.8-201ENST00000620171 435 ntBASIC3.07□□□□□ -1.92
ACTBP60709 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC3.07□□□□□ -1.92
ACTBP60709 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.07□□□□□ -1.92
ACTBP60709 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
ACTBP60709 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.07□□□□□ -1.92
ACTBP60709 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
ACTBP60709 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
ACTBP60709 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
ACTBP60709 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
ACTBP60709 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
ACTBP60709 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.06□□□□□ -1.92
ACTBP60709 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
ACTBP60709 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.06□□□□□ -1.92
ACTBP60709 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
ACTBP60709 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
ACTBP60709 RPS3AP26-201ENST00000398259 784 ntBASIC3.06□□□□□ -1.92
ACTBP60709 SNORA3.3-201ENST00000408712 125 ntBASIC3.06□□□□□ -1.92
ACTBP60709 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
ACTBP60709 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.06□□□□□ -1.92
ACTBP60709 AC023128.2-201ENST00000420880 1223 ntBASIC3.06□□□□□ -1.92
ACTBP60709 RPL23AP82-202ENST00000427528 469 ntBASIC3.06□□□□□ -1.92
ACTBP60709 AL353705.1-201ENST00000433468 480 ntBASIC3.06□□□□□ -1.92
ACTBP60709 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
ACTBP60709 AC125238.1-201ENST00000448842 249 ntBASIC3.06□□□□□ -1.92
ACTBP60709 AC104308.1-201ENST00000454621 333 ntBASIC3.06□□□□□ -1.92
ACTBP60709 HMGN1P18-201ENST00000457642 277 ntBASIC3.06□□□□□ -1.92
ACTBP60709 AC089999.1-201ENST00000460336 374 ntBASIC3.06□□□□□ -1.92
ACTBP60709 CENPBD1P1-201ENST00000464061 469 ntBASIC3.06□□□□□ -1.92
ACTBP60709 AC022034.3-201ENST00000471393 478 ntBASIC3.06□□□□□ -1.92
ACTBP60709 HMGN2P13-201ENST00000476476 274 ntBASIC3.06□□□□□ -1.92
ACTBP60709 RN7SL132P-201ENST00000478131 296 ntBASIC3.06□□□□□ -1.92
ACTBP60709 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
ACTBP60709 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.06□□□□□ -1.92
ACTBP60709 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.06□□□□□ -1.92
ACTBP60709 SNORA70.19-201ENST00000516717 90 ntBASIC3.06□□□□□ -1.92
ACTBP60709 RNU6-1073P-201ENST00000517182 106 ntBASIC3.06□□□□□ -1.92
ACTBP60709 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.06□□□□□ -1.92
ACTBP60709 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.06□□□□□ -1.92
ACTBP60709 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.06□□□□□ -1.92
ACTBP60709 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.06□□□□□ -1.92
ACTBP60709 AC023161.2-201ENST00000551218 780 ntBASIC3.06□□□□□ -1.92
ACTBP60709 DUXAP6-201ENST00000553858 601 ntBASIC3.06□□□□□ -1.92
ACTBP60709 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.06□□□□□ -1.92
ACTBP60709 AL049874.4-201ENST00000557593 255 ntBASIC3.06□□□□□ -1.92
ACTBP60709 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC3.06□□□□□ -1.92
ACTBP60709 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
ACTBP60709 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.06□□□□□ -1.92
ACTBP60709 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
ACTBP60709 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
ACTBP60709 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
ACTBP60709 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
ACTBP60709 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.06□□□□□ -1.92
ACTBP60709 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
ACTBP60709 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.05□□□□□ -1.92
ACTBP60709 NSRP1P1-201ENST00000444067 1693 ntBASIC3.05□□□□□ -1.92
ACTBP60709 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.05□□□□□ -1.92
ACTBP60709 AC007823.1-201ENST00000569932 1566 ntBASIC3.05□□□□□ -1.92
ACTBP60709 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
ACTBP60709 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
ACTBP60709 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
ACTBP60709 RN7SKP280-201ENST00000364196 304 ntBASIC3.05□□□□□ -1.92
ACTBP60709 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.05□□□□□ -1.92
ACTBP60709 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
ACTBP60709 RNU6-452P-201ENST00000384406 107 ntBASIC3.05□□□□□ -1.92
ACTBP60709 RNU1-101P-201ENST00000391171 127 ntBASIC3.05□□□□□ -1.92
ACTBP60709 SNORA57.1-201ENST00000391227 145 ntBASIC3.05□□□□□ -1.92
ACTBP60709 BTBD10P2-201ENST00000404779 676 ntBASIC3.05□□□□□ -1.92
ACTBP60709 RNU2-65P-201ENST00000410162 185 ntBASIC3.05□□□□□ -1.92
ACTBP60709 RNA5SP293-201ENST00000410527 113 ntBASIC3.05□□□□□ -1.92
ACTBP60709 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
ACTBP60709 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.05□□□□□ -1.92
ACTBP60709 RPL7P2-201ENST00000427639 268 ntBASIC3.05□□□□□ -1.92
ACTBP60709 AL160175.1-201ENST00000428124 247 ntBASIC3.05□□□□□ -1.92
ACTBP60709 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.05□□□□□ -1.92
ACTBP60709 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.05□□□□□ -1.92
ACTBP60709 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.05□□□□□ -1.92
ACTBP60709 RN7SL594P-201ENST00000470590 287 ntBASIC3.05□□□□□ -1.92
ACTBP60709 AC023598.1-201ENST00000472521 361 ntBASIC3.05□□□□□ -1.92
ACTBP60709 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.05□□□□□ -1.92
ACTBP60709 AL139099.1-201ENST00000497398 403 ntBASIC3.05□□□□□ -1.92
ACTBP60709 ATG10-AS1-201ENST00000504846 648 ntBASIC3.05□□□□□ -1.92
ACTBP60709 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
ACTBP60709 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.05□□□□□ -1.92
ACTBP60709 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.05□□□□□ -1.92
ACTBP60709 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.05□□□□□ -1.92
ACTBP60709 SNORD59.2-201ENST00000516873 68 ntBASIC3.05□□□□□ -1.92
ACTBP60709 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.05□□□□□ -1.92
ACTBP60709 AC107934.2-201ENST00000518653 310 ntBASIC3.05□□□□□ -1.92
ACTBP60709 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.05□□□□□ -1.92
ACTBP60709 AC006518.1-201ENST00000541449 943 ntBASIC3.05□□□□□ -1.92
ACTBP60709 AC084033.1-201ENST00000550830 633 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms