Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 MIR7-3-201ENST00000384898 110 ntBASIC3.54□□□□□ -1.84
RORAP35398 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.54□□□□□ -1.84
RORAP35398 ATP5A1P2-201ENST00000412323 255 ntBASIC3.54□□□□□ -1.84
RORAP35398 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.54□□□□□ -1.84
RORAP35398 AC023128.2-201ENST00000420880 1223 ntBASIC3.54□□□□□ -1.84
RORAP35398 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.54□□□□□ -1.84
RORAP35398 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.54□□□□□ -1.84
RORAP35398 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.54□□□□□ -1.84
RORAP35398 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.54□□□□□ -1.84
RORAP35398 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.54□□□□□ -1.84
RORAP35398 AC106707.2-201ENST00000484182 374 ntBASIC3.54□□□□□ -1.84
RORAP35398 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.54□□□□□ -1.84
RORAP35398 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.54□□□□□ -1.84
RORAP35398 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.54□□□□□ -1.84
RORAP35398 AC104619.4-201ENST00000510773 249 ntBASIC3.54□□□□□ -1.84
RORAP35398 HMGN1P15-201ENST00000513870 295 ntBASIC3.54□□□□□ -1.84
RORAP35398 SUMO2P20-201ENST00000520803 283 ntBASIC3.54□□□□□ -1.84
RORAP35398 CIR1P1-201ENST00000524055 1133 ntBASIC3.54□□□□□ -1.84
RORAP35398 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.54□□□□□ -1.84
RORAP35398 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RORAP35398 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.54□□□□□ -1.84
RORAP35398 PDCL2P2-201ENST00000533651 189 ntBASIC3.54□□□□□ -1.84
RORAP35398 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.54□□□□□ -1.84
RORAP35398 AC233266.2-201ENST00000567067 528 ntBASIC3.54□□□□□ -1.84
RORAP35398 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.54□□□□□ -1.84
RORAP35398 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC3.54□□□□□ -1.84
RORAP35398 MIR3944-201ENST00000581277 108 ntBASIC3.54□□□□□ -1.84
RORAP35398 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.54□□□□□ -1.84
RORAP35398 OR4H6P-202ENST00000603819 340 ntBASIC3.54□□□□□ -1.84
RORAP35398 FRG1DP-201ENST00000635586 771 ntBASIC3.54□□□□□ -1.84
RORAP35398 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RORAP35398 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RORAP35398 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
RORAP35398 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RORAP35398 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RORAP35398 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RORAP35398 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.53□□□□□ -1.84
RORAP35398 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RORAP35398 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
RORAP35398 AC007256.1-201ENST00000392253 2765 ntBASIC3.53□□□□□ -1.84
RORAP35398 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RORAP35398 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RORAP35398 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RORAP35398 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.53□□□□□ -1.84
RORAP35398 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
RORAP35398 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.53□□□□□ -1.84
RORAP35398 RNU1-18P-201ENST00000363062 164 ntBASIC3.53□□□□□ -1.84
RORAP35398 RNU6-1005P-201ENST00000384519 107 ntBASIC3.53□□□□□ -1.84
RORAP35398 MIR607-201ENST00000385241 96 ntBASIC3.53□□□□□ -1.84
RORAP35398 ATP5F1P4-201ENST00000397288 746 ntBASIC3.53□□□□□ -1.84
RORAP35398 MTCO3P31-201ENST00000405526 789 ntBASIC3.53□□□□□ -1.84
RORAP35398 MTATP6P31-201ENST00000406985 692 ntBASIC3.53□□□□□ -1.84
RORAP35398 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.53□□□□□ -1.84
RORAP35398 CRYBB2P1-203ENST00000415709 538 ntBASIC3.53□□□□□ -1.84
RORAP35398 FAM204CP-201ENST00000424489 642 ntBASIC3.53□□□□□ -1.84
RORAP35398 ARF4P2-201ENST00000430209 526 ntBASIC3.53□□□□□ -1.84
RORAP35398 HMGN2P31-201ENST00000432430 273 ntBASIC3.53□□□□□ -1.84
RORAP35398 HMGB1P45-201ENST00000435986 653 ntBASIC3.53□□□□□ -1.84
RORAP35398 RPS3AP46-201ENST00000448352 682 ntBASIC3.53□□□□□ -1.84
RORAP35398 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.53□□□□□ -1.84
RORAP35398 MTCO3P16-201ENST00000454456 754 ntBASIC3.53□□□□□ -1.84
RORAP35398 DNAJC19P1-201ENST00000455312 319 ntBASIC3.53□□□□□ -1.84
RORAP35398 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.53□□□□□ -1.84
RORAP35398 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3.53□□□□□ -1.84
RORAP35398 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.53□□□□□ -1.84
RORAP35398 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.53□□□□□ -1.84
RORAP35398 BTF3L4P4-201ENST00000506381 449 ntBASIC3.53□□□□□ -1.84
RORAP35398 RN7SKP18-201ENST00000516005 275 ntBASIC3.53□□□□□ -1.84
RORAP35398 RNA5SP208-201ENST00000516156 78 ntBASIC3.53□□□□□ -1.84
RORAP35398 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.53□□□□□ -1.84
RORAP35398 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC3.53□□□□□ -1.84
RORAP35398 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC3.53□□□□□ -1.84
RORAP35398 HIGD1AP10-201ENST00000527837 282 ntBASIC3.53□□□□□ -1.84
RORAP35398 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC3.53□□□□□ -1.84
RORAP35398 AP000619.3-201ENST00000535634 1127 ntBASIC3.53□□□□□ -1.84
RORAP35398 AP003717.3-201ENST00000544832 1180 ntBASIC3.53□□□□□ -1.84
RORAP35398 AL389895.1-201ENST00000554127 252 ntBASIC3.53□□□□□ -1.84
RORAP35398 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.53□□□□□ -1.84
RORAP35398 EIF1P6-201ENST00000600054 334 ntBASIC3.53□□□□□ -1.84
RORAP35398 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC3.53□□□□□ -1.84
RORAP35398 AC107308.1-201ENST00000615897 301 ntBASIC3.53□□□□□ -1.84
RORAP35398 XIST_intron.1-201ENST00000619444 68 ntBASIC3.53□□□□□ -1.84
RORAP35398 HPVC1-201ENST00000629899 1198 ntBASIC3.53□□□□□ -1.84
RORAP35398 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.53□□□□□ -1.84
RORAP35398 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.53□□□□□ -1.84
RORAP35398 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RORAP35398 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RORAP35398 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RORAP35398 AC138915.3-201ENST00000562908 1389 ntBASIC3.52□□□□□ -1.85
RORAP35398 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.52□□□□□ -1.85
RORAP35398 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
RORAP35398 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
RORAP35398 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
RORAP35398 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
RORAP35398 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.52□□□□□ -1.85
RORAP35398 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.52□□□□□ -1.85
RORAP35398 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
RORAP35398 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.52□□□□□ -1.85
RORAP35398 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.52□□□□□ -1.85
RORAP35398 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms