Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 SNX10-203ENST00000409367 746 ntTSL 5 BASIC2.7□□□□□ -1.98
SDCBPO00560 TRGV6-201ENST00000417928 299 ntBASIC2.7□□□□□ -1.98
SDCBPO00560 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC2.7□□□□□ -1.98
SDCBPO00560 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.7□□□□□ -1.98
SDCBPO00560 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC2.7□□□□□ -1.98
SDCBPO00560 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC2.7□□□□□ -1.98
SDCBPO00560 OR6C71P-201ENST00000432580 913 ntBASIC2.7□□□□□ -1.98
SDCBPO00560 RPL21P110-201ENST00000433345 446 ntBASIC2.7□□□□□ -1.98
SDCBPO00560 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC2.7□□□□□ -1.98
SDCBPO00560 PDSS1P2-201ENST00000449397 678 ntBASIC2.7□□□□□ -1.98
SDCBPO00560 UQCRHP3-201ENST00000451503 251 ntBASIC2.7□□□□□ -1.98
SDCBPO00560 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SDCBPO00560 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC2.7□□□□□ -1.98
SDCBPO00560 RN7SL283P-201ENST00000489055 303 ntBASIC2.7□□□□□ -1.98
SDCBPO00560 AC093663.1-201ENST00000497190 394 ntBASIC2.7□□□□□ -1.98
SDCBPO00560 ACTR3BP4-201ENST00000503033 1244 ntBASIC2.7□□□□□ -1.98
SDCBPO00560 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC2.7□□□□□ -1.98
SDCBPO00560 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC2.7□□□□□ -1.98
SDCBPO00560 AC010265.1-201ENST00000513509 211 ntBASIC2.7□□□□□ -1.98
SDCBPO00560 RN7SKP157-201ENST00000516174 282 ntBASIC2.7□□□□□ -1.98
SDCBPO00560 RNU4-18P-201ENST00000516751 149 ntBASIC2.7□□□□□ -1.98
SDCBPO00560 OR5D17P-201ENST00000531492 978 ntBASIC2.7□□□□□ -1.98
SDCBPO00560 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.7□□□□□ -1.98
SDCBPO00560 AC092868.3-201ENST00000560515 784 ntBASIC2.7□□□□□ -1.98
SDCBPO00560 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.7□□□□□ -1.98
SDCBPO00560 AC022884.3-201ENST00000579571 248 ntBASIC2.7□□□□□ -1.98
SDCBPO00560 FAM60CP-201ENST00000591086 664 ntBASIC2.7□□□□□ -1.98
SDCBPO00560 SNORA51-201ENST00000606420 132 ntBASIC2.7□□□□□ -1.98
SDCBPO00560 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC2.7□□□□□ -1.98
SDCBPO00560 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.7□□□□□ -1.98
SDCBPO00560 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC2.7□□□□□ -1.98
SDCBPO00560 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.7□□□□□ -1.98
SDCBPO00560 Z83843.1-201ENST00000604070 3685 ntBASIC2.7□□□□□ -1.98
SDCBPO00560 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC2.7□□□□□ -1.98
SDCBPO00560 AC091152.2-201ENST00000591628 2569 ntBASIC2.7□□□□□ -1.98
SDCBPO00560 GABPAP-201ENST00000419271 1356 ntBASIC2.7□□□□□ -1.98
SDCBPO00560 AC138915.3-201ENST00000562908 1389 ntBASIC2.7□□□□□ -1.98
SDCBPO00560 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC2.7□□□□□ -1.98
SDCBPO00560 DCAF13P3-201ENST00000561147 1334 ntBASIC2.69□□□□□ -1.98
SDCBPO00560 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC2.69□□□□□ -1.98
SDCBPO00560 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
SDCBPO00560 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.69□□□□□ -1.98
SDCBPO00560 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.69□□□□□ -1.98
SDCBPO00560 GLS-203ENST00000409215 632 ntTSL 4 BASIC2.69□□□□□ -1.98
SDCBPO00560 AC013404.1-201ENST00000413068 249 ntBASIC2.69□□□□□ -1.98
SDCBPO00560 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC2.69□□□□□ -1.98
SDCBPO00560 AC069157.1-201ENST00000421749 137 ntBASIC2.69□□□□□ -1.98
SDCBPO00560 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.69□□□□□ -1.98
SDCBPO00560 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC2.69□□□□□ -1.98
SDCBPO00560 OR2AS1P-201ENST00000427827 319 ntBASIC2.69□□□□□ -1.98
SDCBPO00560 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC2.69□□□□□ -1.98
SDCBPO00560 ATP5C1P1-201ENST00000441945 895 ntBASIC2.69□□□□□ -1.98
SDCBPO00560 CDC27P1-201ENST00000445384 715 ntBASIC2.69□□□□□ -1.98
SDCBPO00560 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC2.69□□□□□ -1.98
SDCBPO00560 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC2.69□□□□□ -1.98
SDCBPO00560 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC2.69□□□□□ -1.98
SDCBPO00560 AC092451.1-201ENST00000480211 153 ntBASIC2.69□□□□□ -1.98
SDCBPO00560 AC073522.1-201ENST00000483312 377 ntBASIC2.69□□□□□ -1.98
SDCBPO00560 AC006499.5-201ENST00000505037 514 ntBASIC2.69□□□□□ -1.98
SDCBPO00560 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC2.69□□□□□ -1.98
SDCBPO00560 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC2.69□□□□□ -1.98
SDCBPO00560 OR5H4P-201ENST00000510851 923 ntBASIC2.69□□□□□ -1.98
SDCBPO00560 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC2.69□□□□□ -1.98
SDCBPO00560 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.69□□□□□ -1.98
SDCBPO00560 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
SDCBPO00560 AC007458.1-201ENST00000542812 373 ntBASIC2.69□□□□□ -1.98
SDCBPO00560 HIGD1AP1-201ENST00000550979 275 ntBASIC2.69□□□□□ -1.98
SDCBPO00560 OR4U1P-201ENST00000554958 912 ntBASIC2.69□□□□□ -1.98
SDCBPO00560 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC2.69□□□□□ -1.98
SDCBPO00560 AC006270.2-201ENST00000578523 652 ntBASIC2.69□□□□□ -1.98
SDCBPO00560 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC2.69□□□□□ -1.98
SDCBPO00560 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC2.69□□□□□ -1.98
SDCBPO00560 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC2.69□□□□□ -1.98
SDCBPO00560 AC139769.3-201ENST00000618383 175 ntBASIC2.69□□□□□ -1.98
SDCBPO00560 AL133370.2-201ENST00000619934 439 ntBASIC2.69□□□□□ -1.98
SDCBPO00560 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
SDCBPO00560 AC116563.2-201ENST00000624751 535 ntBASIC2.69□□□□□ -1.98
SDCBPO00560 TEX41-300ENST00000631048 69 ntTSL 5 BASIC2.69□□□□□ -1.98
SDCBPO00560 AC093010.3-201ENST00000570269 15214 ntBASIC2.69□□□□□ -1.98
SDCBPO00560 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SDCBPO00560 AF117829.1-206ENST00000621883 3802 ntBASIC2.69□□□□□ -1.98
SDCBPO00560 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.69□□□□□ -1.98
SDCBPO00560 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
SDCBPO00560 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
SDCBPO00560 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.68□□□□□ -1.98
SDCBPO00560 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC2.68□□□□□ -1.98
SDCBPO00560 AC012498.1-201ENST00000424037 437 ntBASIC2.68□□□□□ -1.98
SDCBPO00560 RPF2P1-201ENST00000424137 906 ntBASIC2.68□□□□□ -1.98
SDCBPO00560 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SDCBPO00560 AC092017.2-201ENST00000427600 362 ntBASIC2.68□□□□□ -1.98
SDCBPO00560 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC2.68□□□□□ -1.98
SDCBPO00560 RPL23AP69-201ENST00000431134 458 ntBASIC2.68□□□□□ -1.98
SDCBPO00560 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC2.68□□□□□ -1.98
SDCBPO00560 AC005019.1-201ENST00000436455 431 ntBASIC2.68□□□□□ -1.98
SDCBPO00560 AC009969.1-201ENST00000438726 172 ntBASIC2.68□□□□□ -1.98
SDCBPO00560 TMED11P-201ENST00000479478 690 ntBASIC2.68□□□□□ -1.98
SDCBPO00560 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC2.68□□□□□ -1.98
SDCBPO00560 PDLIM1P4-201ENST00000504327 1006 ntBASIC2.68□□□□□ -1.98
SDCBPO00560 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC2.68□□□□□ -1.98
SDCBPO00560 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms