Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.21□□□□□ -1.9
KCNIP3Q9Y2W7 RPL21P136-201ENST00000605378 396 ntBASIC3.21□□□□□ -1.9
KCNIP3Q9Y2W7 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.21□□□□□ -1.9
KCNIP3Q9Y2W7 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
KCNIP3Q9Y2W7 AC078880.5-201ENST00000617845 421 ntBASIC3.21□□□□□ -1.9
KCNIP3Q9Y2W7 AC011944.2-201ENST00000624440 683 ntBASIC3.21□□□□□ -1.9
KCNIP3Q9Y2W7 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC3.21□□□□□ -1.9
KCNIP3Q9Y2W7 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.21□□□□□ -1.9
KCNIP3Q9Y2W7 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.21□□□□□ -1.9
KCNIP3Q9Y2W7 MIR4278-201ENST00000636094 69 ntBASIC3.21□□□□□ -1.9
KCNIP3Q9Y2W7 AF001550.2-201ENST00000636643 217 ntBASIC3.21□□□□□ -1.9
KCNIP3Q9Y2W7 BX649567.1-201ENST00000642071 1134 ntBASIC3.21□□□□□ -1.9
KCNIP3Q9Y2W7 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
KCNIP3Q9Y2W7 AC117529.2-201ENST00000512159 2068 ntBASIC3.21□□□□□ -1.9
KCNIP3Q9Y2W7 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
KCNIP3Q9Y2W7 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
KCNIP3Q9Y2W7 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
KCNIP3Q9Y2W7 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.21□□□□□ -1.9
KCNIP3Q9Y2W7 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
KCNIP3Q9Y2W7 AC007496.3-201ENST00000624987 3443 ntBASIC3.21□□□□□ -1.9
KCNIP3Q9Y2W7 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
KCNIP3Q9Y2W7 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
KCNIP3Q9Y2W7 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
KCNIP3Q9Y2W7 ZNF734P-201ENST00000419494 1534 ntBASIC3.2□□□□□ -1.9
KCNIP3Q9Y2W7 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
KCNIP3Q9Y2W7 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
KCNIP3Q9Y2W7 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.2□□□□□ -1.9
KCNIP3Q9Y2W7 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
KCNIP3Q9Y2W7 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC3.2□□□□□ -1.9
KCNIP3Q9Y2W7 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
KCNIP3Q9Y2W7 RNA5SP443-201ENST00000363083 132 ntBASIC3.2□□□□□ -1.9
KCNIP3Q9Y2W7 RNU6-374P-201ENST00000364146 108 ntBASIC3.2□□□□□ -1.9
KCNIP3Q9Y2W7 U6.112-201ENST00000384129 70 ntBASIC3.2□□□□□ -1.9
KCNIP3Q9Y2W7 MIR607-201ENST00000385241 96 ntBASIC3.2□□□□□ -1.9
KCNIP3Q9Y2W7 TAF13P2-201ENST00000416876 286 ntBASIC3.2□□□□□ -1.9
KCNIP3Q9Y2W7 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.2□□□□□ -1.9
KCNIP3Q9Y2W7 AC002075.2-201ENST00000425207 252 ntBASIC3.2□□□□□ -1.9
KCNIP3Q9Y2W7 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.2□□□□□ -1.9
KCNIP3Q9Y2W7 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.2□□□□□ -1.9
KCNIP3Q9Y2W7 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.2□□□□□ -1.9
KCNIP3Q9Y2W7 AC234064.1-201ENST00000436312 247 ntBASIC3.2□□□□□ -1.9
KCNIP3Q9Y2W7 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC3.2□□□□□ -1.9
KCNIP3Q9Y2W7 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.2□□□□□ -1.9
KCNIP3Q9Y2W7 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
KCNIP3Q9Y2W7 RPL7P61-201ENST00000451721 751 ntBASIC3.2□□□□□ -1.9
KCNIP3Q9Y2W7 AC006539.3-201ENST00000454258 129 ntBASIC3.2□□□□□ -1.9
KCNIP3Q9Y2W7 snoU13.1-201ENST00000459157 104 ntBASIC3.2□□□□□ -1.9
KCNIP3Q9Y2W7 NCOR1P1-202ENST00000486162 291 ntBASIC3.2□□□□□ -1.9
KCNIP3Q9Y2W7 RNU2-58P-201ENST00000516403 183 ntBASIC3.2□□□□□ -1.9
KCNIP3Q9Y2W7 RN7SKP60-201ENST00000516985 239 ntBASIC3.2□□□□□ -1.9
KCNIP3Q9Y2W7 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
KCNIP3Q9Y2W7 OR4A45P-201ENST00000529954 901 ntBASIC3.2□□□□□ -1.9
KCNIP3Q9Y2W7 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
KCNIP3Q9Y2W7 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.2□□□□□ -1.9
KCNIP3Q9Y2W7 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.2□□□□□ -1.9
KCNIP3Q9Y2W7 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.2□□□□□ -1.9
KCNIP3Q9Y2W7 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.2□□□□□ -1.9
KCNIP3Q9Y2W7 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
KCNIP3Q9Y2W7 AC107954.1-201ENST00000565906 727 ntBASIC3.2□□□□□ -1.9
KCNIP3Q9Y2W7 AC068790.7-201ENST00000602347 528 ntBASIC3.2□□□□□ -1.9
KCNIP3Q9Y2W7 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
KCNIP3Q9Y2W7 AL137849.1-201ENST00000604767 169 ntBASIC3.2□□□□□ -1.9
KCNIP3Q9Y2W7 AC018754.1-201ENST00000607486 925 ntBASIC3.2□□□□□ -1.9
KCNIP3Q9Y2W7 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
KCNIP3Q9Y2W7 AL161616.1-201ENST00000611867 286 ntBASIC3.2□□□□□ -1.9
KCNIP3Q9Y2W7 AC084824.5-201ENST00000612009 413 ntBASIC3.2□□□□□ -1.9
KCNIP3Q9Y2W7 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
KCNIP3Q9Y2W7 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.2□□□□□ -1.9
KCNIP3Q9Y2W7 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.2□□□□□ -1.9
KCNIP3Q9Y2W7 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
KCNIP3Q9Y2W7 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
KCNIP3Q9Y2W7 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
KCNIP3Q9Y2W7 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
KCNIP3Q9Y2W7 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
KCNIP3Q9Y2W7 SRP72P2-201ENST00000344851 1979 ntBASIC3.2□□□□□ -1.9
KCNIP3Q9Y2W7 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 RNA5SP399-201ENST00000364003 117 ntBASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 RNU1-132P-201ENST00000364300 164 ntBASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 OR1L1-202ENST00000373686 1083 ntBASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 HSPE1P26-201ENST00000405341 275 ntBASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 BTF3P10-201ENST00000433415 495 ntBASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 RPS3AP54-201ENST00000435535 734 ntBASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 RPL7P59-201ENST00000447700 943 ntBASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 AL034418.1-201ENST00000448675 860 ntBASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 AC073264.2-201ENST00000448886 166 ntBASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 Z95152.1-201ENST00000453556 656 ntBASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 AL513533.1-201ENST00000453728 415 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms