Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
SHANK2Q9UPX8 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.59□□□□□ -1.68
SHANK2Q9UPX8 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
SHANK2Q9UPX8 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
SHANK2Q9UPX8 AC107027.3-201ENST00000565095 3473 ntBASIC4.59□□□□□ -1.68
SHANK2Q9UPX8 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
SHANK2Q9UPX8 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC4.59□□□□□ -1.68
SHANK2Q9UPX8 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.58□□□□□ -1.68
SHANK2Q9UPX8 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC4.58□□□□□ -1.68
SHANK2Q9UPX8 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
SHANK2Q9UPX8 AC093156.1-201ENST00000440382 670 ntBASIC4.58□□□□□ -1.68
SHANK2Q9UPX8 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC4.58□□□□□ -1.68
SHANK2Q9UPX8 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.58□□□□□ -1.68
SHANK2Q9UPX8 AC010401.1-201ENST00000463867 348 ntBASIC4.58□□□□□ -1.68
SHANK2Q9UPX8 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SHANK2Q9UPX8 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC4.58□□□□□ -1.68
SHANK2Q9UPX8 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.58□□□□□ -1.68
SHANK2Q9UPX8 RNA5SP367-201ENST00000516557 118 ntBASIC4.58□□□□□ -1.68
SHANK2Q9UPX8 AC011602.1-201ENST00000546484 331 ntBASIC4.58□□□□□ -1.68
SHANK2Q9UPX8 HMGB1P6-201ENST00000569046 646 ntBASIC4.58□□□□□ -1.68
SHANK2Q9UPX8 MIR4425-201ENST00000580572 84 ntBASIC4.58□□□□□ -1.68
SHANK2Q9UPX8 VN1R78P-201ENST00000597393 564 ntBASIC4.58□□□□□ -1.68
SHANK2Q9UPX8 AC231759.1-201ENST00000616455 597 ntBASIC4.58□□□□□ -1.68
SHANK2Q9UPX8 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC4.58□□□□□ -1.68
SHANK2Q9UPX8 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SHANK2Q9UPX8 HSPA8P1-201ENST00000425843 1833 ntBASIC4.58□□□□□ -1.68
SHANK2Q9UPX8 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SHANK2Q9UPX8 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SHANK2Q9UPX8 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
SHANK2Q9UPX8 XGY1-201ENST00000381172 446 ntBASIC4.57□□□□□ -1.68
SHANK2Q9UPX8 AC003685.2-201ENST00000422795 395 ntBASIC4.57□□□□□ -1.68
SHANK2Q9UPX8 BX679664.1-201ENST00000434429 253 ntBASIC4.57□□□□□ -1.68
SHANK2Q9UPX8 AC126389.1-201ENST00000477436 290 ntBASIC4.57□□□□□ -1.68
SHANK2Q9UPX8 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
SHANK2Q9UPX8 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC4.57□□□□□ -1.68
SHANK2Q9UPX8 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.57□□□□□ -1.68
SHANK2Q9UPX8 AC009812.2-201ENST00000517657 457 ntBASIC4.57□□□□□ -1.68
SHANK2Q9UPX8 AC010306.1-201ENST00000523223 1117 ntBASIC4.57□□□□□ -1.68
SHANK2Q9UPX8 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.57□□□□□ -1.68
SHANK2Q9UPX8 AL365400.2-201ENST00000605604 902 ntBASIC4.57□□□□□ -1.68
SHANK2Q9UPX8 CYCSP41-201ENST00000616920 296 ntBASIC4.57□□□□□ -1.68
SHANK2Q9UPX8 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SHANK2Q9UPX8 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SHANK2Q9UPX8 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SHANK2Q9UPX8 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.57□□□□□ -1.68
SHANK2Q9UPX8 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
SHANK2Q9UPX8 AC090971.4-201ENST00000560291 1800 ntBASIC4.57□□□□□ -1.68
SHANK2Q9UPX8 MIR22-201ENST00000362190 85 ntBASIC4.56□□□□□ -1.68
SHANK2Q9UPX8 SNORD15B-201ENST00000384714 146 ntBASIC4.56□□□□□ -1.68
SHANK2Q9UPX8 AC073508.1-201ENST00000428866 656 ntBASIC4.56□□□□□ -1.68
SHANK2Q9UPX8 AC011242.1-201ENST00000433596 1158 ntBASIC4.56□□□□□ -1.68
SHANK2Q9UPX8 RPL37P4-201ENST00000448908 268 ntBASIC4.56□□□□□ -1.68
SHANK2Q9UPX8 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.56□□□□□ -1.68
SHANK2Q9UPX8 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.56□□□□□ -1.68
SHANK2Q9UPX8 VWA8P1-201ENST00000510889 176 ntBASIC4.56□□□□□ -1.68
SHANK2Q9UPX8 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.56□□□□□ -1.68
SHANK2Q9UPX8 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
SHANK2Q9UPX8 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC4.56□□□□□ -1.68
SHANK2Q9UPX8 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.56□□□□□ -1.68
SHANK2Q9UPX8 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
SHANK2Q9UPX8 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC4.56□□□□□ -1.68
SHANK2Q9UPX8 VN1R90P-201ENST00000595717 726 ntBASIC4.56□□□□□ -1.68
SHANK2Q9UPX8 AC025946.2-201ENST00000603398 234 ntBASIC4.56□□□□□ -1.68
SHANK2Q9UPX8 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.56□□□□□ -1.68
SHANK2Q9UPX8 AC021755.1-201ENST00000559747 1447 ntBASIC4.56□□□□□ -1.68
SHANK2Q9UPX8 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
SHANK2Q9UPX8 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SHANK2Q9UPX8 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SHANK2Q9UPX8 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SHANK2Q9UPX8 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.56□□□□□ -1.68
SHANK2Q9UPX8 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.56□□□□□ -1.68
SHANK2Q9UPX8 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
SHANK2Q9UPX8 AL353692.2-201ENST00000407054 335 ntBASIC4.56□□□□□ -1.68
SHANK2Q9UPX8 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.56□□□□□ -1.68
SHANK2Q9UPX8 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.56□□□□□ -1.68
SHANK2Q9UPX8 AC112653.1-201ENST00000443851 386 ntBASIC4.56□□□□□ -1.68
SHANK2Q9UPX8 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC4.56□□□□□ -1.68
SHANK2Q9UPX8 PRDX3P4-201ENST00000470828 747 ntBASIC4.56□□□□□ -1.68
SHANK2Q9UPX8 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.56□□□□□ -1.68
SHANK2Q9UPX8 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.56□□□□□ -1.68
SHANK2Q9UPX8 AC021146.1-201ENST00000511202 716 ntBASIC4.56□□□□□ -1.68
SHANK2Q9UPX8 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SHANK2Q9UPX8 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.56□□□□□ -1.68
SHANK2Q9UPX8 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
SHANK2Q9UPX8 AC000403.1-201ENST00000613696 3585 ntBASIC4.55□□□□□ -1.68
SHANK2Q9UPX8 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.55□□□□□ -1.68
SHANK2Q9UPX8 AC009313.2-201ENST00000417893 1941 ntBASIC4.55□□□□□ -1.68
SHANK2Q9UPX8 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SHANK2Q9UPX8 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
SHANK2Q9UPX8 RNU6-304P-201ENST00000364855 107 ntBASIC4.55□□□□□ -1.68
SHANK2Q9UPX8 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SHANK2Q9UPX8 RAC1P3-201ENST00000416129 580 ntBASIC4.55□□□□□ -1.68
SHANK2Q9UPX8 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.55□□□□□ -1.68
SHANK2Q9UPX8 RPS4XP22-201ENST00000480755 780 ntBASIC4.55□□□□□ -1.68
SHANK2Q9UPX8 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.55□□□□□ -1.68
SHANK2Q9UPX8 MIR2114-201ENST00000516645 80 ntBASIC4.55□□□□□ -1.68
SHANK2Q9UPX8 AL512310.1-201ENST00000548639 172 ntBASIC4.55□□□□□ -1.68
SHANK2Q9UPX8 IGKV1OR2-6-201ENST00000603485 277 ntBASIC4.55□□□□□ -1.68
SHANK2Q9UPX8 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC4.55□□□□□ -1.68
SHANK2Q9UPX8 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms