Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
EBF3Q9H4W6 AC002400.1-201ENST00000569310 726 ntBASIC4.54□□□□□ -1.68
EBF3Q9H4W6 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.54□□□□□ -1.68
EBF3Q9H4W6 EIF1P4-201ENST00000572664 335 ntBASIC4.54□□□□□ -1.68
EBF3Q9H4W6 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.54□□□□□ -1.68
EBF3Q9H4W6 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.54□□□□□ -1.68
EBF3Q9H4W6 VN1R82P-201ENST00000601481 356 ntBASIC4.54□□□□□ -1.68
EBF3Q9H4W6 AC008638.3-201ENST00000603341 463 ntBASIC4.54□□□□□ -1.68
EBF3Q9H4W6 AC079587.1-201ENST00000603846 277 ntBASIC4.54□□□□□ -1.68
EBF3Q9H4W6 AL031281.1-201ENST00000604049 488 ntBASIC4.54□□□□□ -1.68
EBF3Q9H4W6 AP003973.1-201ENST00000604639 691 ntBASIC4.54□□□□□ -1.68
EBF3Q9H4W6 VN1R74P-201ENST00000613259 503 ntBASIC4.54□□□□□ -1.68
EBF3Q9H4W6 STMN1P1-201ENST00000617809 440 ntBASIC4.54□□□□□ -1.68
EBF3Q9H4W6 AC024595.1-201ENST00000623088 387 ntBASIC4.54□□□□□ -1.68
EBF3Q9H4W6 RNA5SP196-201ENST00000625967 102 ntBASIC4.54□□□□□ -1.68
EBF3Q9H4W6 AC244258.1-201ENST00000637553 1071 ntBASIC4.54□□□□□ -1.68
EBF3Q9H4W6 AC068137.3-201ENST00000639191 341 ntBASIC4.54□□□□□ -1.68
EBF3Q9H4W6 AC073869.6-201ENST00000640656 341 ntBASIC4.54□□□□□ -1.68
EBF3Q9H4W6 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
EBF3Q9H4W6 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.54□□□□□ -1.68
EBF3Q9H4W6 AC016588.2-201ENST00000632484 3021 ntBASIC4.54□□□□□ -1.68
EBF3Q9H4W6 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.54□□□□□ -1.68
EBF3Q9H4W6 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.54□□□□□ -1.68
EBF3Q9H4W6 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
EBF3Q9H4W6 ANKRD36BP1-202ENST00000604892 1417 ntBASIC4.54□□□□□ -1.68
EBF3Q9H4W6 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
EBF3Q9H4W6 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
EBF3Q9H4W6 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
EBF3Q9H4W6 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.53□□□□□ -1.68
EBF3Q9H4W6 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
EBF3Q9H4W6 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.53□□□□□ -1.68
EBF3Q9H4W6 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
EBF3Q9H4W6 OR56B2P-201ENST00000317102 954 ntBASIC4.53□□□□□ -1.68
EBF3Q9H4W6 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
EBF3Q9H4W6 RNU6-666P-201ENST00000363499 107 ntBASIC4.53□□□□□ -1.68
EBF3Q9H4W6 RNU1-64P-201ENST00000365443 163 ntBASIC4.53□□□□□ -1.68
EBF3Q9H4W6 RNU6-413P-201ENST00000384115 107 ntBASIC4.53□□□□□ -1.68
EBF3Q9H4W6 RNY3P14-201ENST00000384309 102 ntBASIC4.53□□□□□ -1.68
EBF3Q9H4W6 SNORA40.2-201ENST00000390847 128 ntBASIC4.53□□□□□ -1.68
EBF3Q9H4W6 RN7SKP167-201ENST00000411047 285 ntBASIC4.53□□□□□ -1.68
EBF3Q9H4W6 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.53□□□□□ -1.68
EBF3Q9H4W6 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
EBF3Q9H4W6 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC4.53□□□□□ -1.68
EBF3Q9H4W6 DPY19L1P2-201ENST00000426647 915 ntBASIC4.53□□□□□ -1.68
EBF3Q9H4W6 DPPA2P1-201ENST00000428060 556 ntBASIC4.53□□□□□ -1.68
EBF3Q9H4W6 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
EBF3Q9H4W6 YWHAEP5-201ENST00000431545 765 ntBASIC4.53□□□□□ -1.68
EBF3Q9H4W6 AL606662.1-201ENST00000445763 553 ntBASIC4.53□□□□□ -1.68
EBF3Q9H4W6 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.53□□□□□ -1.68
EBF3Q9H4W6 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC4.53□□□□□ -1.68
EBF3Q9H4W6 MTCYBP1-201ENST00000454315 1119 ntBASIC4.53□□□□□ -1.68
EBF3Q9H4W6 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
EBF3Q9H4W6 snoZ278.1-201ENST00000517059 112 ntBASIC4.53□□□□□ -1.68
EBF3Q9H4W6 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC4.53□□□□□ -1.68
EBF3Q9H4W6 OR5G4P-201ENST00000525251 760 ntBASIC4.53□□□□□ -1.68
EBF3Q9H4W6 AC010198.2-201ENST00000550612 259 ntBASIC4.53□□□□□ -1.68
EBF3Q9H4W6 TVP23BP1-201ENST00000557500 617 ntBASIC4.53□□□□□ -1.68
EBF3Q9H4W6 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.53□□□□□ -1.68
EBF3Q9H4W6 AC011260.1-201ENST00000578420 472 ntBASIC4.53□□□□□ -1.68
EBF3Q9H4W6 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC4.53□□□□□ -1.68
EBF3Q9H4W6 MIR3611-201ENST00000584484 83 ntBASIC4.53□□□□□ -1.68
EBF3Q9H4W6 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.53□□□□□ -1.68
EBF3Q9H4W6 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC4.53□□□□□ -1.68
EBF3Q9H4W6 AC125494.3-201ENST00000602759 455 ntBASIC4.53□□□□□ -1.68
EBF3Q9H4W6 AL139395.1-201ENST00000603662 160 ntBASIC4.53□□□□□ -1.68
EBF3Q9H4W6 DUXAP11-201ENST00000603858 526 ntBASIC4.53□□□□□ -1.68
EBF3Q9H4W6 AC011451.2-201ENST00000604303 598 ntBASIC4.53□□□□□ -1.68
EBF3Q9H4W6 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC4.53□□□□□ -1.68
EBF3Q9H4W6 AC017083.3-201ENST00000609955 700 ntBASIC4.53□□□□□ -1.68
EBF3Q9H4W6 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.53□□□□□ -1.68
EBF3Q9H4W6 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
EBF3Q9H4W6 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
EBF3Q9H4W6 U6.42-201ENST00000618440 107 ntBASIC4.53□□□□□ -1.68
EBF3Q9H4W6 AL356266.1-201ENST00000623311 483 ntBASIC4.53□□□□□ -1.68
EBF3Q9H4W6 MIR492-201ENST00000638676 116 ntBASIC4.53□□□□□ -1.68
EBF3Q9H4W6 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
EBF3Q9H4W6 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
EBF3Q9H4W6 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
EBF3Q9H4W6 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.53□□□□□ -1.68
EBF3Q9H4W6 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
EBF3Q9H4W6 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.53□□□□□ -1.69
EBF3Q9H4W6 LARP1BP1-201ENST00000506036 1359 ntBASIC4.53□□□□□ -1.69
EBF3Q9H4W6 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.52□□□□□ -1.69
EBF3Q9H4W6 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
EBF3Q9H4W6 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.52□□□□□ -1.69
EBF3Q9H4W6 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
EBF3Q9H4W6 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.52□□□□□ -1.69
EBF3Q9H4W6 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
EBF3Q9H4W6 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
EBF3Q9H4W6 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
EBF3Q9H4W6 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
EBF3Q9H4W6 RNU5E-4P-201ENST00000364931 120 ntBASIC4.52□□□□□ -1.69
EBF3Q9H4W6 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
EBF3Q9H4W6 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC4.52□□□□□ -1.69
EBF3Q9H4W6 RNU6-532P-201ENST00000384318 107 ntBASIC4.52□□□□□ -1.69
EBF3Q9H4W6 MIR93-201ENST00000385024 80 ntBASIC4.52□□□□□ -1.69
EBF3Q9H4W6 MIR134-201ENST00000385258 73 ntBASIC4.52□□□□□ -1.69
EBF3Q9H4W6 HSPD1P16-201ENST00000402302 394 ntBASIC4.52□□□□□ -1.69
EBF3Q9H4W6 AL079342.2-201ENST00000403367 482 ntBASIC4.52□□□□□ -1.69
EBF3Q9H4W6 ZNF603P-201ENST00000405613 487 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms