Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.3□□□□□ -1.72
ZNF549Q6P9A3 AC233280.2-201ENST00000603917 1070 ntBASIC4.3□□□□□ -1.72
ZNF549Q6P9A3 AC128687.1-201ENST00000605304 619 ntBASIC4.3□□□□□ -1.72
ZNF549Q6P9A3 AC108747.1-201ENST00000609508 535 ntBASIC4.3□□□□□ -1.72
ZNF549Q6P9A3 AL136295.6-201ENST00000610486 658 ntBASIC4.3□□□□□ -1.72
ZNF549Q6P9A3 Z99129.1-201ENST00000612510 255 ntBASIC4.3□□□□□ -1.72
ZNF549Q6P9A3 AL021997.2-201ENST00000615674 271 ntBASIC4.3□□□□□ -1.72
ZNF549Q6P9A3 AC025588.4-201ENST00000615802 908 ntBASIC4.3□□□□□ -1.72
ZNF549Q6P9A3 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
ZNF549Q6P9A3 AC006971.1-201ENST00000407916 4486 ntBASIC4.3□□□□□ -1.72
ZNF549Q6P9A3 AC015813.6-201ENST00000624409 5808 ntBASIC4.3□□□□□ -1.72
ZNF549Q6P9A3 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ZNF549Q6P9A3 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ZNF549Q6P9A3 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ZNF549Q6P9A3 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ZNF549Q6P9A3 AC005539.1-201ENST00000443768 1479 ntBASIC4.3□□□□□ -1.72
ZNF549Q6P9A3 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ZNF549Q6P9A3 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.29□□□□□ -1.72
ZNF549Q6P9A3 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ZNF549Q6P9A3 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ZNF549Q6P9A3 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
ZNF549Q6P9A3 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
ZNF549Q6P9A3 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
ZNF549Q6P9A3 A2MP1-204ENST00000566278 4130 ntBASIC4.29□□□□□ -1.72
ZNF549Q6P9A3 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.29□□□□□ -1.72
ZNF549Q6P9A3 RNU6-98P-201ENST00000384173 107 ntBASIC4.29□□□□□ -1.72
ZNF549Q6P9A3 AC136624.1-201ENST00000400791 413 ntBASIC4.29□□□□□ -1.72
ZNF549Q6P9A3 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ZNF549Q6P9A3 AL512430.2-201ENST00000406786 339 ntBASIC4.29□□□□□ -1.72
ZNF549Q6P9A3 RNU6-77P-201ENST00000410554 91 ntBASIC4.29□□□□□ -1.72
ZNF549Q6P9A3 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.29□□□□□ -1.72
ZNF549Q6P9A3 AC092745.2-202ENST00000411880 369 ntBASIC4.29□□□□□ -1.72
ZNF549Q6P9A3 GSTM3P2-201ENST00000412746 530 ntBASIC4.29□□□□□ -1.72
ZNF549Q6P9A3 AC105402.1-201ENST00000413336 545 ntBASIC4.29□□□□□ -1.72
ZNF549Q6P9A3 CYCSP46-201ENST00000423569 204 ntBASIC4.29□□□□□ -1.72
ZNF549Q6P9A3 MTCO1P54-201ENST00000430139 712 ntBASIC4.29□□□□□ -1.72
ZNF549Q6P9A3 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.29□□□□□ -1.72
ZNF549Q6P9A3 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.29□□□□□ -1.72
ZNF549Q6P9A3 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.29□□□□□ -1.72
ZNF549Q6P9A3 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC4.29□□□□□ -1.72
ZNF549Q6P9A3 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.29□□□□□ -1.72
ZNF549Q6P9A3 RPL9P33-201ENST00000484311 566 ntBASIC4.29□□□□□ -1.72
ZNF549Q6P9A3 ACTG1P13-201ENST00000486987 1043 ntBASIC4.29□□□□□ -1.72
ZNF549Q6P9A3 MTND2P33-201ENST00000506452 1031 ntBASIC4.29□□□□□ -1.72
ZNF549Q6P9A3 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.29□□□□□ -1.72
ZNF549Q6P9A3 CDC42P4-201ENST00000510507 563 ntBASIC4.29□□□□□ -1.72
ZNF549Q6P9A3 RN7SKP92-201ENST00000517266 244 ntBASIC4.29□□□□□ -1.72
ZNF549Q6P9A3 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.29□□□□□ -1.72
ZNF549Q6P9A3 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.29□□□□□ -1.72
ZNF549Q6P9A3 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.29□□□□□ -1.72
ZNF549Q6P9A3 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.29□□□□□ -1.72
ZNF549Q6P9A3 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC4.29□□□□□ -1.72
ZNF549Q6P9A3 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.29□□□□□ -1.72
ZNF549Q6P9A3 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.29□□□□□ -1.72
ZNF549Q6P9A3 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC4.29□□□□□ -1.72
ZNF549Q6P9A3 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
ZNF549Q6P9A3 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.29□□□□□ -1.72
ZNF549Q6P9A3 BNIP3P30-201ENST00000601184 574 ntBASIC4.29□□□□□ -1.72
ZNF549Q6P9A3 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC4.29□□□□□ -1.72
ZNF549Q6P9A3 AC025594.3-201ENST00000613068 790 ntBASIC4.29□□□□□ -1.72
ZNF549Q6P9A3 AL356121.2-201ENST00000624715 780 ntBASIC4.29□□□□□ -1.72
ZNF549Q6P9A3 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
ZNF549Q6P9A3 AC099654.13-201ENST00000639774 207 ntBASIC4.29□□□□□ -1.72
ZNF549Q6P9A3 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
ZNF549Q6P9A3 AC012618.3-205ENST00000637896 1496 ntBASIC4.29□□□□□ -1.72
ZNF549Q6P9A3 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.29□□□□□ -1.72
ZNF549Q6P9A3 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ZNF549Q6P9A3 GTF2H2B-203ENST00000508065 1432 ntBASIC4.29□□□□□ -1.72
ZNF549Q6P9A3 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC4.29□□□□□ -1.72
ZNF549Q6P9A3 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
ZNF549Q6P9A3 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 AC093775.1-201ENST00000624154 1868 ntBASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 DCAF13P3-201ENST00000561147 1334 ntBASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 RNU6-532P-201ENST00000384318 107 ntBASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 ATP5F1P4-201ENST00000397288 746 ntBASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 RPS3AP23-201ENST00000401762 784 ntBASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 AL133264.1-201ENST00000407157 562 ntBASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 PIGPP2-201ENST00000411569 458 ntBASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 AL161449.1-201ENST00000414531 1199 ntBASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 AC119751.6-201ENST00000416712 186 ntBASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 RPL23AP4-201ENST00000427757 463 ntBASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 HLA-N-201ENST00000437516 135 ntBASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 USP9YP22-201ENST00000438971 294 ntBASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 RPL23AP52-201ENST00000439311 478 ntBASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 RBMX2P4-201ENST00000441256 376 ntBASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 AC073522.1-201ENST00000483312 377 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms