Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.34□□□□□ -1.71
HOXC13P31276 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.34□□□□□ -1.71
HOXC13P31276 AC040904.1-201ENST00000590850 223 ntBASIC4.34□□□□□ -1.71
HOXC13P31276 AC008687.2-201ENST00000597865 520 ntBASIC4.34□□□□□ -1.71
HOXC13P31276 AC146944.4-201ENST00000602697 718 ntBASIC4.34□□□□□ -1.71
HOXC13P31276 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HOXC13P31276 MIR432-201ENST00000606207 94 ntBASIC4.34□□□□□ -1.71
HOXC13P31276 AC013468.1-201ENST00000608680 598 ntBASIC4.34□□□□□ -1.71
HOXC13P31276 AC090425.2-201ENST00000608818 501 ntBASIC4.34□□□□□ -1.71
HOXC13P31276 AL031666.3-201ENST00000609320 1006 ntBASIC4.34□□□□□ -1.71
HOXC13P31276 AC069200.1-201ENST00000609511 323 ntBASIC4.34□□□□□ -1.71
HOXC13P31276 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HOXC13P31276 AC064801.1-201ENST00000612025 407 ntBASIC4.34□□□□□ -1.71
HOXC13P31276 AL050303.3-201ENST00000613704 284 ntBASIC4.34□□□□□ -1.71
HOXC13P31276 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.34□□□□□ -1.71
HOXC13P31276 CR392039.5-201ENST00000623201 510 ntBASIC4.34□□□□□ -1.71
HOXC13P31276 AC006927.2-201ENST00000639256 389 ntBASIC4.34□□□□□ -1.71
HOXC13P31276 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
HOXC13P31276 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
HOXC13P31276 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.72
HOXC13P31276 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.72
HOXC13P31276 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.72
HOXC13P31276 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.33□□□□□ -1.72
HOXC13P31276 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
HOXC13P31276 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
HOXC13P31276 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
HOXC13P31276 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HOXC13P31276 SCN1A-220ENST00000641603 12506 ntBASIC4.33□□□□□ -1.72
HOXC13P31276 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HOXC13P31276 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HOXC13P31276 RNU4-40P-201ENST00000364351 143 ntBASIC4.33□□□□□ -1.72
HOXC13P31276 RNU6-837P-201ENST00000391056 108 ntBASIC4.33□□□□□ -1.72
HOXC13P31276 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HOXC13P31276 AL035405.1-201ENST00000400795 710 ntBASIC4.33□□□□□ -1.72
HOXC13P31276 RSL24D1P1-201ENST00000404972 493 ntBASIC4.33□□□□□ -1.72
HOXC13P31276 ZNF603P-201ENST00000405613 487 ntBASIC4.33□□□□□ -1.72
HOXC13P31276 RPS3AP9-201ENST00000417027 792 ntBASIC4.33□□□□□ -1.72
HOXC13P31276 PAICSP7-201ENST00000419829 962 ntBASIC4.33□□□□□ -1.72
HOXC13P31276 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC4.33□□□□□ -1.72
HOXC13P31276 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.33□□□□□ -1.72
HOXC13P31276 FABP3P2-201ENST00000453169 399 ntBASIC4.33□□□□□ -1.72
HOXC13P31276 NF1P3-201ENST00000457709 450 ntBASIC4.33□□□□□ -1.72
HOXC13P31276 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HOXC13P31276 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.33□□□□□ -1.72
HOXC13P31276 AC006499.6-201ENST00000511169 607 ntBASIC4.33□□□□□ -1.72
HOXC13P31276 AC016065.2-201ENST00000514530 444 ntBASIC4.33□□□□□ -1.72
HOXC13P31276 HIGD1AP6-201ENST00000521833 279 ntBASIC4.33□□□□□ -1.72
HOXC13P31276 AC068339.2-201ENST00000534395 618 ntBASIC4.33□□□□□ -1.72
HOXC13P31276 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.33□□□□□ -1.72
HOXC13P31276 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC4.33□□□□□ -1.72
HOXC13P31276 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC4.33□□□□□ -1.72
HOXC13P31276 BPTFP1-201ENST00000579209 492 ntBASIC4.33□□□□□ -1.72
HOXC13P31276 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.33□□□□□ -1.72
HOXC13P31276 MIR4644-201ENST00000579929 84 ntBASIC4.33□□□□□ -1.72
HOXC13P31276 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.33□□□□□ -1.72
HOXC13P31276 AC245884.10-201ENST00000597355 337 ntBASIC4.33□□□□□ -1.72
HOXC13P31276 SNRPGP15-201ENST00000600149 222 ntBASIC4.33□□□□□ -1.72
HOXC13P31276 AC133794.1-201ENST00000602731 914 ntBASIC4.33□□□□□ -1.72
HOXC13P31276 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.33□□□□□ -1.72
HOXC13P31276 AC103710.3-201ENST00000608157 948 ntBASIC4.33□□□□□ -1.72
HOXC13P31276 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.33□□□□□ -1.72
HOXC13P31276 AL121772.2-201ENST00000614331 297 ntBASIC4.33□□□□□ -1.72
HOXC13P31276 MIR7151-201ENST00000617477 60 ntBASIC4.33□□□□□ -1.72
HOXC13P31276 MIR6075-201ENST00000620782 95 ntBASIC4.33□□□□□ -1.72
HOXC13P31276 AC055839.1-201ENST00000634467 498 ntBASIC4.33□□□□□ -1.72
HOXC13P31276 AL356118.1-201ENST00000635272 1078 ntBASIC4.33□□□□□ -1.72
HOXC13P31276 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HOXC13P31276 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
HOXC13P31276 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.32□□□□□ -1.72
HOXC13P31276 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HOXC13P31276 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
HOXC13P31276 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HOXC13P31276 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.32□□□□□ -1.72
HOXC13P31276 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
HOXC13P31276 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.32□□□□□ -1.72
HOXC13P31276 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
HOXC13P31276 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HOXC13P31276 RNU6-335P-201ENST00000364563 113 ntBASIC4.32□□□□□ -1.72
HOXC13P31276 RNU6-1181P-201ENST00000384191 106 ntBASIC4.32□□□□□ -1.72
HOXC13P31276 RNU6-549P-201ENST00000384433 107 ntBASIC4.32□□□□□ -1.72
HOXC13P31276 MIR620-201ENST00000385232 95 ntBASIC4.32□□□□□ -1.72
HOXC13P31276 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.32□□□□□ -1.72
HOXC13P31276 RN7SKP182-201ENST00000410772 298 ntBASIC4.32□□□□□ -1.72
HOXC13P31276 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.32□□□□□ -1.72
HOXC13P31276 AL160275.2-201ENST00000412010 394 ntBASIC4.32□□□□□ -1.72
HOXC13P31276 MTND2P16-201ENST00000419987 799 ntBASIC4.32□□□□□ -1.72
HOXC13P31276 OR8F1P-201ENST00000425243 930 ntBASIC4.32□□□□□ -1.72
HOXC13P31276 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.32□□□□□ -1.72
HOXC13P31276 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.32□□□□□ -1.72
HOXC13P31276 HMGB1P12-201ENST00000438594 598 ntBASIC4.32□□□□□ -1.72
HOXC13P31276 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.32□□□□□ -1.72
HOXC13P31276 SEPT14P24-201ENST00000447236 180 ntBASIC4.32□□□□□ -1.72
HOXC13P31276 RPS29P19-201ENST00000479709 171 ntBASIC4.32□□□□□ -1.72
HOXC13P31276 AF213884.1-201ENST00000488102 463 ntBASIC4.32□□□□□ -1.72
HOXC13P31276 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HOXC13P31276 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HOXC13P31276 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.32□□□□□ -1.72
HOXC13P31276 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HOXC13P31276 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.32□□□□□ -1.72
HOXC13P31276 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 129.6 ms