Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC5.13□□□□□ -1.59
TOP2AP11388 AC008507.1-201ENST00000587506 734 ntBASIC5.13□□□□□ -1.59
TOP2AP11388 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
TOP2AP11388 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC5.12□□□□□ -1.59
TOP2AP11388 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC5.12□□□□□ -1.59
TOP2AP11388 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
TOP2AP11388 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
TOP2AP11388 RNA5SP296-201ENST00000410523 111 ntBASIC5.12□□□□□ -1.59
TOP2AP11388 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC5.12□□□□□ -1.59
TOP2AP11388 MRPL50P2-201ENST00000416821 482 ntBASIC5.12□□□□□ -1.59
TOP2AP11388 MTND5P24-201ENST00000438892 1767 ntBASIC5.12□□□□□ -1.59
TOP2AP11388 AC117522.3-201ENST00000507974 584 ntBASIC5.12□□□□□ -1.59
TOP2AP11388 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.12□□□□□ -1.59
TOP2AP11388 AC017002.4-201ENST00000604721 1525 ntBASIC5.12□□□□□ -1.59
TOP2AP11388 AC006840.1-201ENST00000623069 542 ntBASIC5.12□□□□□ -1.59
TOP2AP11388 AL049780.3-201ENST00000624612 1583 ntBASIC5.12□□□□□ -1.59
TOP2AP11388 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TOP2AP11388 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC5.11□□□□□ -1.59
TOP2AP11388 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC5.11□□□□□ -1.59
TOP2AP11388 SNORA67.4-201ENST00000384688 142 ntBASIC5.11□□□□□ -1.59
TOP2AP11388 RNA5SP21-201ENST00000410917 96 ntBASIC5.11□□□□□ -1.59
TOP2AP11388 BTF3P9-201ENST00000418784 283 ntBASIC5.11□□□□□ -1.59
TOP2AP11388 RPS17P11-201ENST00000474297 293 ntBASIC5.11□□□□□ -1.59
TOP2AP11388 AC107016.2-201ENST00000547968 190 ntBASIC5.11□□□□□ -1.59
TOP2AP11388 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
TOP2AP11388 IGHVIII-44-202ENST00000636235 289 ntBASIC5.11□□□□□ -1.59
TOP2AP11388 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC5.11□□□□□ -1.59
TOP2AP11388 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
TOP2AP11388 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
TOP2AP11388 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TOP2AP11388 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC5.1□□□□□ -1.59
TOP2AP11388 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC5.1□□□□□ -1.59
TOP2AP11388 AC243829.7-201ENST00000633081 225 ntBASIC5.1□□□□□ -1.59
TOP2AP11388 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
TOP2AP11388 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC5.1□□□□□ -1.59
TOP2AP11388 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TOP2AP11388 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC5.09□□□□□ -1.59
TOP2AP11388 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.09□□□□□ -1.59
TOP2AP11388 RPL7P26-201ENST00000333817 754 ntBASIC5.09□□□□□ -1.59
TOP2AP11388 AL035407.1-201ENST00000429211 571 ntBASIC5.09□□□□□ -1.59
TOP2AP11388 ARL5AP4-201ENST00000430731 512 ntBASIC5.09□□□□□ -1.59
TOP2AP11388 RAB28P3-201ENST00000448325 597 ntBASIC5.09□□□□□ -1.59
TOP2AP11388 ST13P14-201ENST00000474095 734 ntBASIC5.09□□□□□ -1.59
TOP2AP11388 AC111000.2-201ENST00000507775 550 ntBASIC5.09□□□□□ -1.59
TOP2AP11388 AC021146.1-201ENST00000511202 716 ntBASIC5.09□□□□□ -1.59
TOP2AP11388 OR10D4P-201ENST00000525892 951 ntBASIC5.09□□□□□ -1.59
TOP2AP11388 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TOP2AP11388 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC5.09□□□□□ -1.59
TOP2AP11388 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.09□□□□□ -1.59
TOP2AP11388 EIF5A2P1-201ENST00000564027 460 ntBASIC5.09□□□□□ -1.59
TOP2AP11388 AC234778.2-201ENST00000566241 354 ntBASIC5.09□□□□□ -1.59
TOP2AP11388 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC5.09□□□□□ -1.59
TOP2AP11388 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.09□□□□□ -1.59
TOP2AP11388 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.09□□□□□ -1.59
TOP2AP11388 AC005183.1-201ENST00000603687 1979 ntBASIC5.08□□□□□ -1.6
TOP2AP11388 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TOP2AP11388 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
TOP2AP11388 RNU2-52P-201ENST00000410680 190 ntBASIC5.08□□□□□ -1.6
TOP2AP11388 BMS1P22-201ENST00000414726 313 ntBASIC5.08□□□□□ -1.6
TOP2AP11388 RNU1-41P-201ENST00000516161 162 ntBASIC5.08□□□□□ -1.6
TOP2AP11388 RNU1-48P-201ENST00000516400 162 ntBASIC5.08□□□□□ -1.6
TOP2AP11388 AC104027.1-201ENST00000521887 300 ntBASIC5.08□□□□□ -1.6
TOP2AP11388 OR4C2P-201ENST00000530855 1064 ntBASIC5.08□□□□□ -1.6
TOP2AP11388 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TOP2AP11388 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC5.08□□□□□ -1.6
TOP2AP11388 AC104446.1-201ENST00000613728 1321 ntBASIC5.08□□□□□ -1.6
TOP2AP11388 AC091544.4-201ENST00000555268 342 ntBASIC5.07□□□□□ -1.6
TOP2AP11388 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC5.07□□□□□ -1.6
TOP2AP11388 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TOP2AP11388 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TOP2AP11388 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
TOP2AP11388 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TOP2AP11388 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TOP2AP11388 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TOP2AP11388 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC5.07□□□□□ -1.6
TOP2AP11388 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
TOP2AP11388 AC073508.1-201ENST00000428866 656 ntBASIC5.07□□□□□ -1.6
TOP2AP11388 HMGB3P6-201ENST00000444896 598 ntBASIC5.07□□□□□ -1.6
TOP2AP11388 AC233982.1-201ENST00000451247 436 ntBASIC5.07□□□□□ -1.6
TOP2AP11388 AC109329.2-201ENST00000519658 482 ntBASIC5.07□□□□□ -1.6
TOP2AP11388 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
TOP2AP11388 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
TOP2AP11388 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
TOP2AP11388 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TOP2AP11388 RNU1-75P-201ENST00000347264 129 ntBASIC5.06□□□□□ -1.6
TOP2AP11388 OR13C3-201ENST00000374781 1108 ntBASIC5.06□□□□□ -1.6
TOP2AP11388 AL356057.1-202ENST00000402263 756 ntBASIC5.06□□□□□ -1.6
TOP2AP11388 Z93242.1-201ENST00000427102 353 ntBASIC5.06□□□□□ -1.6
TOP2AP11388 RPL29P29-201ENST00000448725 423 ntBASIC5.06□□□□□ -1.6
TOP2AP11388 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC5.06□□□□□ -1.6
TOP2AP11388 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC5.06□□□□□ -1.6
TOP2AP11388 IGHVII-62-1-201ENST00000519283 235 ntBASIC5.06□□□□□ -1.6
TOP2AP11388 AP004607.9-201ENST00000618202 316 ntBASIC5.06□□□□□ -1.6
TOP2AP11388 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
TOP2AP11388 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TOP2AP11388 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
TOP2AP11388 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TOP2AP11388 AL049555.1-201ENST00000562834 1933 ntBASIC5.05□□□□□ -1.6
TOP2AP11388 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC5.05□□□□□ -1.6
TOP2AP11388 AL672167.1-206ENST00000356293 943 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms