Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC5.06□□□□□ -1.6
COL3A1P02461 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC5.05□□□□□ -1.6
COL3A1P02461 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
COL3A1P02461 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.05□□□□□ -1.6
COL3A1P02461 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
COL3A1P02461 AC125336.1-201ENST00000508893 2827 ntBASIC5.05□□□□□ -1.6
COL3A1P02461 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC5.05□□□□□ -1.6
COL3A1P02461 AC006484.1-201ENST00000435086 1884 ntBASIC5.05□□□□□ -1.6
COL3A1P02461 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
COL3A1P02461 RNU4-92P-201ENST00000363783 136 ntBASIC5.05□□□□□ -1.6
COL3A1P02461 RNU5E-4P-201ENST00000364931 120 ntBASIC5.05□□□□□ -1.6
COL3A1P02461 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
COL3A1P02461 SNORA9-201ENST00000384215 133 ntBASIC5.05□□□□□ -1.6
COL3A1P02461 SNORA57.3-201ENST00000411095 141 ntBASIC5.05□□□□□ -1.6
COL3A1P02461 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.05□□□□□ -1.6
COL3A1P02461 PTP4A1P5-201ENST00000420305 455 ntBASIC5.05□□□□□ -1.6
COL3A1P02461 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC5.05□□□□□ -1.6
COL3A1P02461 CYCSP43-201ENST00000438233 310 ntBASIC5.05□□□□□ -1.6
COL3A1P02461 RPL21P11-201ENST00000461458 483 ntBASIC5.05□□□□□ -1.6
COL3A1P02461 RPL5P30-201ENST00000465511 891 ntBASIC5.05□□□□□ -1.6
COL3A1P02461 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.05□□□□□ -1.6
COL3A1P02461 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.05□□□□□ -1.6
COL3A1P02461 AC091951.3-201ENST00000504093 246 ntBASIC5.05□□□□□ -1.6
COL3A1P02461 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.05□□□□□ -1.6
COL3A1P02461 AC023632.4-201ENST00000517783 191 ntBASIC5.05□□□□□ -1.6
COL3A1P02461 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC5.05□□□□□ -1.6
COL3A1P02461 HMGB1P46-201ENST00000520062 610 ntBASIC5.05□□□□□ -1.6
COL3A1P02461 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC5.05□□□□□ -1.6
COL3A1P02461 AC022695.1-201ENST00000522089 237 ntBASIC5.05□□□□□ -1.6
COL3A1P02461 STX3-204ENST00000530221 534 ntTSL 5 BASIC5.05□□□□□ -1.6
COL3A1P02461 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC5.05□□□□□ -1.6
COL3A1P02461 AC025918.2-201ENST00000558683 763 ntBASIC5.05□□□□□ -1.6
COL3A1P02461 AP000403.1-201ENST00000603349 851 ntBASIC5.05□□□□□ -1.6
COL3A1P02461 AP000811.1-201ENST00000603803 651 ntBASIC5.05□□□□□ -1.6
COL3A1P02461 DUXAP11-201ENST00000603858 526 ntBASIC5.05□□□□□ -1.6
COL3A1P02461 AL161756.2-201ENST00000604597 246 ntBASIC5.05□□□□□ -1.6
COL3A1P02461 AL590240.3-201ENST00000621416 943 ntBASIC5.05□□□□□ -1.6
COL3A1P02461 FRG1DP-201ENST00000635586 771 ntBASIC5.05□□□□□ -1.6
COL3A1P02461 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC5.05□□□□□ -1.6
COL3A1P02461 ZNF285B-201ENST00000561698 1767 ntBASIC5.05□□□□□ -1.6
COL3A1P02461 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
COL3A1P02461 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
COL3A1P02461 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
COL3A1P02461 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
COL3A1P02461 AP004289.2-201ENST00000444413 1457 ntBASIC5.04□□□□□ -1.6
COL3A1P02461 AC024560.2-201ENST00000507981 1497 ntBASIC5.04□□□□□ -1.6
COL3A1P02461 AL049781.1-201ENST00000623195 3585 ntBASIC5.04□□□□□ -1.6
COL3A1P02461 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
COL3A1P02461 RNU6-694P-201ENST00000364071 147 ntBASIC5.04□□□□□ -1.6
COL3A1P02461 RNA5SP51-201ENST00000364750 119 ntBASIC5.04□□□□□ -1.6
COL3A1P02461 OR5H15-201ENST00000383696 930 ntBASIC5.04□□□□□ -1.6
COL3A1P02461 SNORD116-12-201ENST00000384468 92 ntBASIC5.04□□□□□ -1.6
COL3A1P02461 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
COL3A1P02461 AL133264.1-201ENST00000407157 562 ntBASIC5.04□□□□□ -1.6
COL3A1P02461 FCF1P9-201ENST00000412546 282 ntBASIC5.04□□□□□ -1.6
COL3A1P02461 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC5.04□□□□□ -1.6
COL3A1P02461 AC091390.3-201ENST00000426478 338 ntBASIC5.04□□□□□ -1.6
COL3A1P02461 DEFB130D-201ENST00000426866 237 ntBASIC5.04□□□□□ -1.6
COL3A1P02461 MTCO1P43-201ENST00000431831 488 ntBASIC5.04□□□□□ -1.6
COL3A1P02461 RPL37P1-201ENST00000432310 284 ntBASIC5.04□□□□□ -1.6
COL3A1P02461 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC5.04□□□□□ -1.6
COL3A1P02461 ACTR3P3-201ENST00000480448 893 ntBASIC5.04□□□□□ -1.6
COL3A1P02461 RPL21P47-201ENST00000483696 477 ntBASIC5.04□□□□□ -1.6
COL3A1P02461 AC079203.1-201ENST00000487972 404 ntBASIC5.04□□□□□ -1.6
COL3A1P02461 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC5.04□□□□□ -1.6
COL3A1P02461 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC5.04□□□□□ -1.6
COL3A1P02461 AL133241.1-201ENST00000556832 487 ntBASIC5.04□□□□□ -1.6
COL3A1P02461 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.04□□□□□ -1.6
COL3A1P02461 AC092868.3-201ENST00000560515 784 ntBASIC5.04□□□□□ -1.6
COL3A1P02461 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC5.04□□□□□ -1.6
COL3A1P02461 AC006362.1-201ENST00000567392 174 ntBASIC5.04□□□□□ -1.6
COL3A1P02461 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.04□□□□□ -1.6
COL3A1P02461 AGGF1P4-201ENST00000568249 801 ntBASIC5.04□□□□□ -1.6
COL3A1P02461 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC5.04□□□□□ -1.6
COL3A1P02461 AC027281.1-201ENST00000574178 758 ntBASIC5.04□□□□□ -1.6
COL3A1P02461 AP005262.1-201ENST00000582646 997 ntBASIC5.04□□□□□ -1.6
COL3A1P02461 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC5.04□□□□□ -1.6
COL3A1P02461 AC015813.4-201ENST00000610469 179 ntBASIC5.04□□□□□ -1.6
COL3A1P02461 AC007490.1-201ENST00000624321 703 ntBASIC5.04□□□□□ -1.6
COL3A1P02461 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
COL3A1P02461 BDP1P-201ENST00000582658 1990 ntBASIC5.04□□□□□ -1.6
COL3A1P02461 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
COL3A1P02461 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
COL3A1P02461 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
COL3A1P02461 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.04□□□□□ -1.6
COL3A1P02461 AL049737.1-201ENST00000413920 1403 ntBASIC5.03□□□□□ -1.6
COL3A1P02461 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
COL3A1P02461 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
COL3A1P02461 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.03□□□□□ -1.6
COL3A1P02461 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
COL3A1P02461 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
COL3A1P02461 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
COL3A1P02461 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
COL3A1P02461 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
COL3A1P02461 SNORD113-6-201ENST00000363345 75 ntBASIC5.03□□□□□ -1.6
COL3A1P02461 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC5.03□□□□□ -1.6
COL3A1P02461 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC5.03□□□□□ -1.6
COL3A1P02461 RNU6-1215P-201ENST00000384441 102 ntBASIC5.03□□□□□ -1.6
COL3A1P02461 SNORD3H-201ENST00000384486 214 ntBASIC5.03□□□□□ -1.6
COL3A1P02461 RPL21P17-201ENST00000397467 475 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms