Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.18□□□□□ -1.9
SGCEO43556 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SGCEO43556 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.18□□□□□ -1.9
SGCEO43556 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SGCEO43556 RN7SKP280-201ENST00000364196 304 ntBASIC3.18□□□□□ -1.9
SGCEO43556 RNU6-1293P-201ENST00000384077 107 ntBASIC3.18□□□□□ -1.9
SGCEO43556 RNU6-98P-201ENST00000384173 107 ntBASIC3.18□□□□□ -1.9
SGCEO43556 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SGCEO43556 AP000567.1-201ENST00000406413 156 ntBASIC3.18□□□□□ -1.9
SGCEO43556 MIR1193-201ENST00000408109 78 ntBASIC3.18□□□□□ -1.9
SGCEO43556 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
SGCEO43556 AL512504.1-201ENST00000415494 778 ntBASIC3.18□□□□□ -1.9
SGCEO43556 FO393419.3-201ENST00000428741 282 ntBASIC3.18□□□□□ -1.9
SGCEO43556 RPL7P29-201ENST00000437151 728 ntBASIC3.18□□□□□ -1.9
SGCEO43556 AL645931.1-201ENST00000439737 410 ntBASIC3.18□□□□□ -1.9
SGCEO43556 AL513343.1-201ENST00000451818 792 ntBASIC3.18□□□□□ -1.9
SGCEO43556 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.18□□□□□ -1.9
SGCEO43556 AC007688.1-201ENST00000475592 759 ntBASIC3.18□□□□□ -1.9
SGCEO43556 AC091959.2-201ENST00000477363 321 ntBASIC3.18□□□□□ -1.9
SGCEO43556 RPS4XP22-201ENST00000480755 780 ntBASIC3.18□□□□□ -1.9
SGCEO43556 HMGN1P11-201ENST00000508668 303 ntBASIC3.18□□□□□ -1.9
SGCEO43556 MTND4LP31-201ENST00000514859 294 ntBASIC3.18□□□□□ -1.9
SGCEO43556 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.18□□□□□ -1.9
SGCEO43556 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.18□□□□□ -1.9
SGCEO43556 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.18□□□□□ -1.9
SGCEO43556 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.18□□□□□ -1.9
SGCEO43556 AP003717.3-201ENST00000544832 1180 ntBASIC3.18□□□□□ -1.9
SGCEO43556 AC023161.2-201ENST00000551218 780 ntBASIC3.18□□□□□ -1.9
SGCEO43556 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.18□□□□□ -1.9
SGCEO43556 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.18□□□□□ -1.9
SGCEO43556 AC010735.1-201ENST00000567305 1026 ntBASIC3.18□□□□□ -1.9
SGCEO43556 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.18□□□□□ -1.9
SGCEO43556 AC112230.1-201ENST00000604342 547 ntBASIC3.18□□□□□ -1.9
SGCEO43556 SNORA51-201ENST00000606420 132 ntBASIC3.18□□□□□ -1.9
SGCEO43556 AL391497.1-201ENST00000608671 547 ntBASIC3.18□□□□□ -1.9
SGCEO43556 AC006023.2-201ENST00000609916 167 ntBASIC3.18□□□□□ -1.9
SGCEO43556 RNU6-156P-201ENST00000621869 107 ntBASIC3.18□□□□□ -1.9
SGCEO43556 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.18□□□□□ -1.9
SGCEO43556 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SGCEO43556 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.18□□□□□ -1.9
SGCEO43556 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SGCEO43556 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SGCEO43556 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SGCEO43556 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SGCEO43556 AL513302.2-201ENST00000562313 1842 ntBASIC3.17□□□□□ -1.9
SGCEO43556 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SGCEO43556 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
SGCEO43556 RNA5SP295-201ENST00000362655 121 ntBASIC3.17□□□□□ -1.9
SGCEO43556 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.17□□□□□ -1.9
SGCEO43556 RPL7P60-201ENST00000397636 735 ntBASIC3.17□□□□□ -1.9
SGCEO43556 AC010385.1-201ENST00000412374 256 ntBASIC3.17□□□□□ -1.9
SGCEO43556 MTCO3P4-201ENST00000419236 787 ntBASIC3.17□□□□□ -1.9
SGCEO43556 AC023128.2-201ENST00000420880 1223 ntBASIC3.17□□□□□ -1.9
SGCEO43556 NIPA2P1-201ENST00000426223 976 ntBASIC3.17□□□□□ -1.9
SGCEO43556 EIF2S2P3-201ENST00000428356 999 ntBASIC3.17□□□□□ -1.9
SGCEO43556 RPL23AP69-201ENST00000431134 458 ntBASIC3.17□□□□□ -1.9
SGCEO43556 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.17□□□□□ -1.9
SGCEO43556 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.17□□□□□ -1.9
SGCEO43556 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.17□□□□□ -1.9
SGCEO43556 MRPS31P2-201ENST00000451581 518 ntBASIC3.17□□□□□ -1.9
SGCEO43556 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.17□□□□□ -1.9
SGCEO43556 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.17□□□□□ -1.9
SGCEO43556 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.17□□□□□ -1.9
SGCEO43556 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.17□□□□□ -1.9
SGCEO43556 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.17□□□□□ -1.9
SGCEO43556 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.17□□□□□ -1.9
SGCEO43556 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.17□□□□□ -1.9
SGCEO43556 AC010198.2-201ENST00000550612 259 ntBASIC3.17□□□□□ -1.9
SGCEO43556 OR4H12P-201ENST00000556269 907 ntBASIC3.17□□□□□ -1.9
SGCEO43556 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.17□□□□□ -1.9
SGCEO43556 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.17□□□□□ -1.9
SGCEO43556 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.17□□□□□ -1.9
SGCEO43556 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.17□□□□□ -1.9
SGCEO43556 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.17□□□□□ -1.9
SGCEO43556 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.17□□□□□ -1.9
SGCEO43556 MIR3690-201ENST00000580266 75 ntBASIC3.17□□□□□ -1.9
SGCEO43556 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.17□□□□□ -1.9
SGCEO43556 AC245128.3-201ENST00000594721 748 ntBASIC3.17□□□□□ -1.9
SGCEO43556 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.17□□□□□ -1.9
SGCEO43556 SNRPGP15-201ENST00000600149 222 ntBASIC3.17□□□□□ -1.9
SGCEO43556 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.17□□□□□ -1.9
SGCEO43556 AC006077.1-201ENST00000604746 343 ntBASIC3.17□□□□□ -1.9
SGCEO43556 AL365400.2-201ENST00000605604 902 ntBASIC3.17□□□□□ -1.9
SGCEO43556 AC073111.2-201ENST00000605657 1075 ntBASIC3.17□□□□□ -1.9
SGCEO43556 HMGN2P28-201ENST00000606102 262 ntBASIC3.17□□□□□ -1.9
SGCEO43556 PLCE1P1-201ENST00000622094 305 ntBASIC3.17□□□□□ -1.9
SGCEO43556 MAPK10-362ENST00000641864 4484 ntBASIC3.17□□□□□ -1.9
SGCEO43556 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SGCEO43556 AC093908.1-201ENST00000623125 8092 ntBASIC3.17□□□□□ -1.9
SGCEO43556 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.16□□□□□ -1.9
SGCEO43556 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SGCEO43556 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
SGCEO43556 AC007256.1-201ENST00000392253 2765 ntBASIC3.16□□□□□ -1.9
SGCEO43556 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
SGCEO43556 METTL21EP-201ENST00000298105 713 ntBASIC3.16□□□□□ -1.9
SGCEO43556 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SGCEO43556 RNU6-600P-201ENST00000362524 99 ntBASIC3.16□□□□□ -1.9
SGCEO43556 RNU6-283P-201ENST00000364788 107 ntBASIC3.16□□□□□ -1.9
SGCEO43556 RNA5SP479-201ENST00000364858 117 ntBASIC3.16□□□□□ -1.9
SGCEO43556 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms