Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 MIR1303-201ENST00000408625 86 ntBASIC3.85□□□□□ -1.79
MSH4O15457 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.85□□□□□ -1.79
MSH4O15457 AC073508.1-201ENST00000428866 656 ntBASIC3.85□□□□□ -1.79
MSH4O15457 RPL7P31-201ENST00000450192 724 ntBASIC3.85□□□□□ -1.79
MSH4O15457 RPL7P49-201ENST00000471402 708 ntBASIC3.85□□□□□ -1.79
MSH4O15457 ACTG1P13-201ENST00000486987 1043 ntBASIC3.85□□□□□ -1.79
MSH4O15457 RPL21P13-201ENST00000488305 481 ntBASIC3.85□□□□□ -1.79
MSH4O15457 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC3.85□□□□□ -1.79
MSH4O15457 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.85□□□□□ -1.79
MSH4O15457 AC010468.3-201ENST00000508225 458 ntBASIC3.85□□□□□ -1.79
MSH4O15457 AC018797.3-201ENST00000513388 1241 ntBASIC3.85□□□□□ -1.79
MSH4O15457 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.85□□□□□ -1.79
MSH4O15457 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.85□□□□□ -1.79
MSH4O15457 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.85□□□□□ -1.79
MSH4O15457 OR5AK3P-201ENST00000527486 1297 ntBASIC3.85□□□□□ -1.79
MSH4O15457 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
MSH4O15457 CYP2C60P-201ENST00000566088 139 ntBASIC3.85□□□□□ -1.79
MSH4O15457 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.85□□□□□ -1.79
MSH4O15457 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.85□□□□□ -1.79
MSH4O15457 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
MSH4O15457 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.85□□□□□ -1.79
MSH4O15457 AC084757.4-201ENST00000616350 526 ntBASIC3.85□□□□□ -1.79
MSH4O15457 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.85□□□□□ -1.79
MSH4O15457 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.85□□□□□ -1.79
MSH4O15457 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.85□□□□□ -1.79
MSH4O15457 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
MSH4O15457 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
MSH4O15457 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
MSH4O15457 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.84□□□□□ -1.79
MSH4O15457 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
MSH4O15457 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
MSH4O15457 RNVU1-14-201ENST00000384770 164 ntBASIC3.84□□□□□ -1.79
MSH4O15457 Z99755.1-201ENST00000414048 380 ntBASIC3.84□□□□□ -1.79
MSH4O15457 AC023128.2-201ENST00000420880 1223 ntBASIC3.84□□□□□ -1.79
MSH4O15457 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.84□□□□□ -1.79
MSH4O15457 RPL30P3-201ENST00000424262 333 ntBASIC3.84□□□□□ -1.79
MSH4O15457 AL031736.2-201ENST00000426573 787 ntBASIC3.84□□□□□ -1.79
MSH4O15457 AC005019.1-201ENST00000436455 431 ntBASIC3.84□□□□□ -1.79
MSH4O15457 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.84□□□□□ -1.79
MSH4O15457 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.84□□□□□ -1.79
MSH4O15457 RPL21P10-201ENST00000463521 490 ntBASIC3.84□□□□□ -1.79
MSH4O15457 PLGLA-201ENST00000465668 449 ntBASIC3.84□□□□□ -1.79
MSH4O15457 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
MSH4O15457 RPL30P11-201ENST00000495304 339 ntBASIC3.84□□□□□ -1.79
MSH4O15457 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
MSH4O15457 WBP1LP4-201ENST00000505043 344 ntBASIC3.84□□□□□ -1.79
MSH4O15457 HSPD1P15-201ENST00000505573 1122 ntBASIC3.84□□□□□ -1.79
MSH4O15457 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.84□□□□□ -1.79
MSH4O15457 SNORA70.19-201ENST00000516717 90 ntBASIC3.84□□□□□ -1.79
MSH4O15457 SNORA76.2-201ENST00000517095 137 ntBASIC3.84□□□□□ -1.79
MSH4O15457 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.84□□□□□ -1.79
MSH4O15457 OR4R3P-201ENST00000525084 838 ntBASIC3.84□□□□□ -1.79
MSH4O15457 OR4A2P-201ENST00000527276 913 ntBASIC3.84□□□□□ -1.79
MSH4O15457 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.84□□□□□ -1.79
MSH4O15457 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC3.84□□□□□ -1.79
MSH4O15457 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.84□□□□□ -1.79
MSH4O15457 NCAPGP2-201ENST00000557911 754 ntBASIC3.84□□□□□ -1.79
MSH4O15457 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.84□□□□□ -1.79
MSH4O15457 RN7SL339P-201ENST00000580597 296 ntBASIC3.84□□□□□ -1.79
MSH4O15457 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.84□□□□□ -1.79
MSH4O15457 AC067852.7-201ENST00000623270 535 ntBASIC3.84□□□□□ -1.79
MSH4O15457 AP006248.3-201ENST00000623580 594 ntBASIC3.84□□□□□ -1.79
MSH4O15457 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
MSH4O15457 OR11H5P-202ENST00000641612 1325 ntBASIC3.84□□□□□ -1.79
MSH4O15457 HSPA8P19-201ENST00000505359 1517 ntBASIC3.84□□□□□ -1.8
MSH4O15457 MTND5P11-201ENST00000511037 1812 ntBASIC3.84□□□□□ -1.8
MSH4O15457 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.84□□□□□ -1.8
MSH4O15457 AL513302.2-201ENST00000562313 1842 ntBASIC3.84□□□□□ -1.8
MSH4O15457 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
MSH4O15457 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
MSH4O15457 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
MSH4O15457 SNORD46.1-201ENST00000364139 104 ntBASIC3.83□□□□□ -1.8
MSH4O15457 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
MSH4O15457 MTATP6P31-201ENST00000406985 692 ntBASIC3.83□□□□□ -1.8
MSH4O15457 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.83□□□□□ -1.8
MSH4O15457 PNRC2P1-201ENST00000423940 420 ntBASIC3.83□□□□□ -1.8
MSH4O15457 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.83□□□□□ -1.8
MSH4O15457 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.83□□□□□ -1.8
MSH4O15457 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.83□□□□□ -1.8
MSH4O15457 AL353718.1-201ENST00000451028 517 ntBASIC3.83□□□□□ -1.8
MSH4O15457 RPS4XP2-201ENST00000458402 793 ntBASIC3.83□□□□□ -1.8
MSH4O15457 FCF1P8-201ENST00000510322 597 ntBASIC3.83□□□□□ -1.8
MSH4O15457 AC074250.1-201ENST00000511117 192 ntBASIC3.83□□□□□ -1.8
MSH4O15457 OR8K2P-201ENST00000524645 927 ntBASIC3.83□□□□□ -1.8
MSH4O15457 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.83□□□□□ -1.8
MSH4O15457 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.83□□□□□ -1.8
MSH4O15457 AC005476.1-201ENST00000554427 397 ntBASIC3.83□□□□□ -1.8
MSH4O15457 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.83□□□□□ -1.8
MSH4O15457 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.83□□□□□ -1.8
MSH4O15457 MIR3944-201ENST00000581277 108 ntBASIC3.83□□□□□ -1.8
MSH4O15457 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.83□□□□□ -1.8
MSH4O15457 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.83□□□□□ -1.8
MSH4O15457 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC3.83□□□□□ -1.8
MSH4O15457 AC006557.5-201ENST00000603126 811 ntBASIC3.83□□□□□ -1.8
MSH4O15457 AL671309.1-201ENST00000603750 544 ntBASIC3.83□□□□□ -1.8
MSH4O15457 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.83□□□□□ -1.8
MSH4O15457 AC083865.1-201ENST00000636634 831 ntBASIC3.83□□□□□ -1.8
MSH4O15457 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
MSH4O15457 AC134882.1-201ENST00000603738 1676 ntBASIC3.83□□□□□ -1.8
MSH4O15457 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 143.2 ms