Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC4.15□□□□□ -1.75
O00370 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC4.15□□□□□ -1.75
O00370 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.15□□□□□ -1.75
O00370 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC4.15□□□□□ -1.75
O00370 MTCO1P53-201ENST00000441633 699 ntBASIC4.15□□□□□ -1.75
O00370 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.15□□□□□ -1.75
O00370 AL592437.1-201ENST00000443781 492 ntBASIC4.15□□□□□ -1.75
O00370 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
O00370 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.15□□□□□ -1.75
O00370 EXOSC3P1-201ENST00000448649 500 ntBASIC4.15□□□□□ -1.75
O00370 RPS17P13-201ENST00000448974 407 ntBASIC4.15□□□□□ -1.75
O00370 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.15□□□□□ -1.75
O00370 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.15□□□□□ -1.75
O00370 DUXAP8-207ENST00000456786 622 ntBASIC4.15□□□□□ -1.75
O00370 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.15□□□□□ -1.75
O00370 XACT-201ENST00000468762 497 ntTSL 5 BASIC4.15□□□□□ -1.75
O00370 AC091959.2-201ENST00000477363 321 ntBASIC4.15□□□□□ -1.75
O00370 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.15□□□□□ -1.75
O00370 PTGES3P3-201ENST00000511479 482 ntBASIC4.15□□□□□ -1.75
O00370 AC008837.1-201ENST00000511513 412 ntBASIC4.15□□□□□ -1.75
O00370 OR7E13P-201ENST00000526052 910 ntBASIC4.15□□□□□ -1.75
O00370 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.15□□□□□ -1.75
O00370 LRRC6P1-201ENST00000532188 885 ntBASIC4.15□□□□□ -1.75
O00370 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.15□□□□□ -1.75
O00370 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.15□□□□□ -1.75
O00370 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.15□□□□□ -1.75
O00370 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.15□□□□□ -1.75
O00370 MTCO1P40-201ENST00000574371 625 ntBASIC4.15□□□□□ -1.75
O00370 MTCO2P2-201ENST00000591258 225 ntBASIC4.15□□□□□ -1.75
O00370 VN1R79P-201ENST00000593540 513 ntBASIC4.15□□□□□ -1.75
O00370 AL157392.4-201ENST00000609756 345 ntBASIC4.15□□□□□ -1.75
O00370 AL355816.2-201ENST00000610049 647 ntBASIC4.15□□□□□ -1.75
O00370 DUXAP10-204ENST00000612052 616 ntBASIC4.15□□□□□ -1.75
O00370 VN1R74P-201ENST00000613259 503 ntBASIC4.15□□□□□ -1.75
O00370 AL050303.3-201ENST00000613704 284 ntBASIC4.15□□□□□ -1.75
O00370 AL591424.2-201ENST00000617023 128 ntBASIC4.15□□□□□ -1.75
O00370 MIR6875-201ENST00000617506 72 ntBASIC4.15□□□□□ -1.75
O00370 AL139089.1-201ENST00000620372 975 ntBASIC4.15□□□□□ -1.75
O00370 AL121594.5-201ENST00000631724 573 ntBASIC4.15□□□□□ -1.75
O00370 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.15□□□□□ -1.75
O00370 BX649567.1-201ENST00000642071 1134 ntBASIC4.15□□□□□ -1.75
O00370 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
O00370 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
O00370 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
O00370 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
O00370 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
O00370 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.14□□□□□ -1.75
O00370 UBE3AP2-201ENST00000429033 2259 ntBASIC4.14□□□□□ -1.75
O00370 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.14□□□□□ -1.75
O00370 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
O00370 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
O00370 Y_RNA.126-201ENST00000363382 111 ntBASIC4.14□□□□□ -1.75
O00370 RNU5E-10P-201ENST00000363506 118 ntBASIC4.14□□□□□ -1.75
O00370 RNU6-353P-201ENST00000364266 108 ntBASIC4.14□□□□□ -1.75
O00370 RNA5SP167-201ENST00000365461 116 ntBASIC4.14□□□□□ -1.75
O00370 Z98941.1-201ENST00000407764 100 ntBASIC4.14□□□□□ -1.75
O00370 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.14□□□□□ -1.75
O00370 RPL7P53-201ENST00000421245 739 ntBASIC4.14□□□□□ -1.75
O00370 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.14□□□□□ -1.75
O00370 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
O00370 RPS26P40-201ENST00000435209 294 ntBASIC4.14□□□□□ -1.75
O00370 AC009263.1-201ENST00000441193 1239 ntBASIC4.14□□□□□ -1.75
O00370 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.14□□□□□ -1.75
O00370 AC244505.3-201ENST00000454598 187 ntBASIC4.14□□□□□ -1.75
O00370 RPS20P32-201ENST00000456044 356 ntBASIC4.14□□□□□ -1.75
O00370 HMGB3P30-201ENST00000457863 606 ntBASIC4.14□□□□□ -1.75
O00370 AC020898.1-201ENST00000474167 787 ntBASIC4.14□□□□□ -1.75
O00370 PPIAP15-201ENST00000479662 484 ntBASIC4.14□□□□□ -1.75
O00370 VN1R105P-201ENST00000486595 910 ntBASIC4.14□□□□□ -1.75
O00370 AC106872.2-201ENST00000494303 480 ntBASIC4.14□□□□□ -1.75
O00370 AC092045.1-201ENST00000495716 1231 ntBASIC4.14□□□□□ -1.75
O00370 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.14□□□□□ -1.75
O00370 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.14□□□□□ -1.75
O00370 AC010460.1-201ENST00000507087 466 ntBASIC4.14□□□□□ -1.75
O00370 AC093752.1-206ENST00000511823 336 ntBASIC4.14□□□□□ -1.75
O00370 IGHV3-32-201ENST00000519182 355 ntBASIC4.14□□□□□ -1.75
O00370 AC104417.1-201ENST00000523974 751 ntBASIC4.14□□□□□ -1.75
O00370 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.14□□□□□ -1.75
O00370 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.14□□□□□ -1.75
O00370 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.14□□□□□ -1.75
O00370 RN7SL703P-201ENST00000578485 302 ntBASIC4.14□□□□□ -1.75
O00370 AC090312.2-201ENST00000582687 378 ntBASIC4.14□□□□□ -1.75
O00370 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.14□□□□□ -1.75
O00370 AL020997.2-201ENST00000602607 184 ntBASIC4.14□□□□□ -1.75
O00370 AL606490.9-201ENST00000603331 271 ntBASIC4.14□□□□□ -1.75
O00370 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.14□□□□□ -1.75
O00370 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.14□□□□□ -1.75
O00370 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.14□□□□□ -1.75
O00370 AC090772.4-201ENST00000623599 362 ntBASIC4.14□□□□□ -1.75
O00370 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.14□□□□□ -1.75
O00370 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.14□□□□□ -1.75
O00370 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.14□□□□□ -1.75
O00370 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
O00370 AC119744.1-201ENST00000454746 1715 ntBASIC4.14□□□□□ -1.75
O00370 RPS4XP5-202ENST00000449995 1334 ntBASIC4.14□□□□□ -1.75
O00370 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
O00370 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
O00370 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
O00370 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
O00370 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms