Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 RNU1-94P-201ENST00000362627 173 ntBASIC5.12□□□□□ -1.59
SALL3Q9BXA9 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SALL3Q9BXA9 Y_RNA.517-201ENST00000384551 106 ntBASIC5.12□□□□□ -1.59
SALL3Q9BXA9 Y_RNA.560-201ENST00000384689 102 ntBASIC5.12□□□□□ -1.59
SALL3Q9BXA9 RNU6-757P-201ENST00000410334 100 ntBASIC5.12□□□□□ -1.59
SALL3Q9BXA9 RN7SKP27-201ENST00000410684 333 ntBASIC5.12□□□□□ -1.59
SALL3Q9BXA9 AC010385.1-201ENST00000412374 256 ntBASIC5.12□□□□□ -1.59
SALL3Q9BXA9 TAF13P2-201ENST00000416876 286 ntBASIC5.12□□□□□ -1.59
SALL3Q9BXA9 LINC01347-201ENST00000417964 355 ntBASIC5.12□□□□□ -1.59
SALL3Q9BXA9 RPL30P16-201ENST00000419341 429 ntBASIC5.12□□□□□ -1.59
SALL3Q9BXA9 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.12□□□□□ -1.59
SALL3Q9BXA9 DPRXP1-201ENST00000426312 460 ntBASIC5.12□□□□□ -1.59
SALL3Q9BXA9 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.12□□□□□ -1.59
SALL3Q9BXA9 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC5.12□□□□□ -1.59
SALL3Q9BXA9 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.12□□□□□ -1.59
SALL3Q9BXA9 MTND3P1-201ENST00000441336 220 ntBASIC5.12□□□□□ -1.59
SALL3Q9BXA9 AL353572.1-201ENST00000442490 417 ntBASIC5.12□□□□□ -1.59
SALL3Q9BXA9 AC097499.1-201ENST00000444277 208 ntBASIC5.12□□□□□ -1.59
SALL3Q9BXA9 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC5.12□□□□□ -1.59
SALL3Q9BXA9 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC5.12□□□□□ -1.59
SALL3Q9BXA9 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.12□□□□□ -1.59
SALL3Q9BXA9 RPL7P1-201ENST00000468161 747 ntBASIC5.12□□□□□ -1.59
SALL3Q9BXA9 RPL7P9-201ENST00000468715 747 ntBASIC5.12□□□□□ -1.59
SALL3Q9BXA9 AC091959.2-201ENST00000477363 321 ntBASIC5.12□□□□□ -1.59
SALL3Q9BXA9 RPS29P19-201ENST00000479709 171 ntBASIC5.12□□□□□ -1.59
SALL3Q9BXA9 AC107398.1-201ENST00000486904 505 ntBASIC5.12□□□□□ -1.59
SALL3Q9BXA9 AC068724.1-201ENST00000487100 792 ntBASIC5.12□□□□□ -1.59
SALL3Q9BXA9 AC084024.2-201ENST00000503480 791 ntBASIC5.12□□□□□ -1.59
SALL3Q9BXA9 AC108475.1-201ENST00000507880 950 ntBASIC5.12□□□□□ -1.59
SALL3Q9BXA9 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
SALL3Q9BXA9 HNRNPKP5-201ENST00000515300 253 ntBASIC5.12□□□□□ -1.59
SALL3Q9BXA9 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.12□□□□□ -1.59
SALL3Q9BXA9 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC5.12□□□□□ -1.59
SALL3Q9BXA9 OR5M7P-201ENST00000526140 972 ntBASIC5.12□□□□□ -1.59
SALL3Q9BXA9 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC5.12□□□□□ -1.59
SALL3Q9BXA9 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC5.12□□□□□ -1.59
SALL3Q9BXA9 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
SALL3Q9BXA9 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC5.12□□□□□ -1.59
SALL3Q9BXA9 AC063950.1-201ENST00000552036 308 ntBASIC5.12□□□□□ -1.59
SALL3Q9BXA9 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC5.12□□□□□ -1.59
SALL3Q9BXA9 PARP1P2-201ENST00000556806 195 ntBASIC5.12□□□□□ -1.59
SALL3Q9BXA9 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC5.12□□□□□ -1.59
SALL3Q9BXA9 MIR3912-201ENST00000577566 105 ntBASIC5.12□□□□□ -1.59
SALL3Q9BXA9 RN7SL600P-201ENST00000581811 299 ntBASIC5.12□□□□□ -1.59
SALL3Q9BXA9 MIR3611-201ENST00000584484 83 ntBASIC5.12□□□□□ -1.59
SALL3Q9BXA9 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC5.12□□□□□ -1.59
SALL3Q9BXA9 BNIP3P22-201ENST00000593399 556 ntBASIC5.12□□□□□ -1.59
SALL3Q9BXA9 AL392112.1-201ENST00000605115 829 ntBASIC5.12□□□□□ -1.59
SALL3Q9BXA9 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
SALL3Q9BXA9 DLEU2_1.1-201ENST00000612089 120 ntBASIC5.12□□□□□ -1.59
SALL3Q9BXA9 DLEU2_1.2-201ENST00000614667 120 ntBASIC5.12□□□□□ -1.59
SALL3Q9BXA9 AC022509.4-201ENST00000621404 572 ntBASIC5.12□□□□□ -1.59
SALL3Q9BXA9 AP001005.3-201ENST00000622049 129 ntBASIC5.12□□□□□ -1.59
SALL3Q9BXA9 MIR3653-201ENST00000625572 110 ntBASIC5.12□□□□□ -1.59
SALL3Q9BXA9 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SALL3Q9BXA9 AC068137.3-201ENST00000639191 341 ntBASIC5.12□□□□□ -1.59
SALL3Q9BXA9 AC073869.6-201ENST00000640656 341 ntBASIC5.12□□□□□ -1.59
SALL3Q9BXA9 MFSD8-245ENST00000641743 948 ntBASIC5.12□□□□□ -1.59
SALL3Q9BXA9 OR52H1-202ENST00000641796 1061 ntBASIC5.12□□□□□ -1.59
SALL3Q9BXA9 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
SALL3Q9BXA9 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SALL3Q9BXA9 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC5.12□□□□□ -1.59
SALL3Q9BXA9 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SALL3Q9BXA9 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
SALL3Q9BXA9 MFSD8-242ENST00000641690 4199 ntBASIC5.12□□□□□ -1.59
SALL3Q9BXA9 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.12□□□□□ -1.59
SALL3Q9BXA9 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
SALL3Q9BXA9 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SALL3Q9BXA9 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
SALL3Q9BXA9 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
SALL3Q9BXA9 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SALL3Q9BXA9 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SALL3Q9BXA9 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SALL3Q9BXA9 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SALL3Q9BXA9 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SALL3Q9BXA9 MT-TH-201ENST00000387441 69 ntBASIC5.11□□□□□ -1.59
SALL3Q9BXA9 AP000357.1-201ENST00000409926 1165 ntBASIC5.11□□□□□ -1.59
SALL3Q9BXA9 RPL23AP26-201ENST00000412728 464 ntBASIC5.11□□□□□ -1.59
SALL3Q9BXA9 OR8G2P-201ENST00000412796 908 ntBASIC5.11□□□□□ -1.59
SALL3Q9BXA9 AC011933.1-201ENST00000413334 321 ntBASIC5.11□□□□□ -1.59
SALL3Q9BXA9 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.11□□□□□ -1.59
SALL3Q9BXA9 OR5AW1P-201ENST00000426334 1006 ntBASIC5.11□□□□□ -1.59
SALL3Q9BXA9 NEK4P1-201ENST00000433383 879 ntBASIC5.11□□□□□ -1.59
SALL3Q9BXA9 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC5.11□□□□□ -1.59
SALL3Q9BXA9 AP000936.3-201ENST00000438127 255 ntBASIC5.11□□□□□ -1.59
SALL3Q9BXA9 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SALL3Q9BXA9 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC5.11□□□□□ -1.59
SALL3Q9BXA9 SUMO2P2-201ENST00000456482 255 ntBASIC5.11□□□□□ -1.59
SALL3Q9BXA9 AC116533.1-201ENST00000459748 321 ntBASIC5.11□□□□□ -1.59
SALL3Q9BXA9 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC5.11□□□□□ -1.59
SALL3Q9BXA9 AC021205.1-201ENST00000468797 348 ntBASIC5.11□□□□□ -1.59
SALL3Q9BXA9 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC5.11□□□□□ -1.59
SALL3Q9BXA9 CDC42P4-201ENST00000510507 563 ntBASIC5.11□□□□□ -1.59
SALL3Q9BXA9 KRT19P6-201ENST00000510983 209 ntBASIC5.11□□□□□ -1.59
SALL3Q9BXA9 snoU109.6-201ENST00000516831 118 ntBASIC5.11□□□□□ -1.59
SALL3Q9BXA9 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SALL3Q9BXA9 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.11□□□□□ -1.59
SALL3Q9BXA9 AC009643.1-201ENST00000532030 391 ntBASIC5.11□□□□□ -1.59
SALL3Q9BXA9 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SALL3Q9BXA9 AL390334.1-201ENST00000556395 450 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms