Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AC139495.1-202ENST00000513164 354 ntBASIC4.18□□□□□ -1.74
SLC44A1Q8WWI5 AC087808.1-201ENST00000520501 361 ntBASIC4.18□□□□□ -1.74
SLC44A1Q8WWI5 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.18□□□□□ -1.74
SLC44A1Q8WWI5 AP001636.2-201ENST00000525517 696 ntBASIC4.18□□□□□ -1.74
SLC44A1Q8WWI5 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
SLC44A1Q8WWI5 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.18□□□□□ -1.74
SLC44A1Q8WWI5 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
SLC44A1Q8WWI5 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.18□□□□□ -1.74
SLC44A1Q8WWI5 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.18□□□□□ -1.74
SLC44A1Q8WWI5 DUXAP6-201ENST00000553858 601 ntBASIC4.18□□□□□ -1.74
SLC44A1Q8WWI5 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.18□□□□□ -1.74
SLC44A1Q8WWI5 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.18□□□□□ -1.74
SLC44A1Q8WWI5 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.18□□□□□ -1.74
SLC44A1Q8WWI5 AC087465.1-201ENST00000560574 245 ntBASIC4.18□□□□□ -1.74
SLC44A1Q8WWI5 AL360157.1-201ENST00000565962 87 ntBASIC4.18□□□□□ -1.74
SLC44A1Q8WWI5 AC079171.1-201ENST00000568788 914 ntBASIC4.18□□□□□ -1.74
SLC44A1Q8WWI5 MIR4715-201ENST00000584117 79 ntBASIC4.18□□□□□ -1.74
SLC44A1Q8WWI5 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.18□□□□□ -1.74
SLC44A1Q8WWI5 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.18□□□□□ -1.74
SLC44A1Q8WWI5 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC4.18□□□□□ -1.74
SLC44A1Q8WWI5 BNIP3P26-201ENST00000600827 554 ntBASIC4.18□□□□□ -1.74
SLC44A1Q8WWI5 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.18□□□□□ -1.74
SLC44A1Q8WWI5 AC104662.1-201ENST00000604448 511 ntBASIC4.18□□□□□ -1.74
SLC44A1Q8WWI5 AL390816.3-201ENST00000604527 1066 ntBASIC4.18□□□□□ -1.74
SLC44A1Q8WWI5 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.18□□□□□ -1.74
SLC44A1Q8WWI5 AP003392.5-201ENST00000607857 415 ntBASIC4.18□□□□□ -1.74
SLC44A1Q8WWI5 AC128687.2-201ENST00000609657 566 ntBASIC4.18□□□□□ -1.74
SLC44A1Q8WWI5 AP003072.4-201ENST00000624580 310 ntBASIC4.18□□□□□ -1.74
SLC44A1Q8WWI5 AL773545.4-201ENST00000637262 310 ntBASIC4.18□□□□□ -1.74
SLC44A1Q8WWI5 AL513478.4-201ENST00000641636 310 ntBASIC4.18□□□□□ -1.74
SLC44A1Q8WWI5 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SLC44A1Q8WWI5 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SLC44A1Q8WWI5 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
SLC44A1Q8WWI5 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.18□□□□□ -1.74
SLC44A1Q8WWI5 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
SLC44A1Q8WWI5 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
SLC44A1Q8WWI5 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SLC44A1Q8WWI5 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.17□□□□□ -1.74
SLC44A1Q8WWI5 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SLC44A1Q8WWI5 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SLC44A1Q8WWI5 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
SLC44A1Q8WWI5 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
SLC44A1Q8WWI5 RNU1-14P-201ENST00000362759 152 ntBASIC4.17□□□□□ -1.74
SLC44A1Q8WWI5 RN7SKP44-201ENST00000363602 316 ntBASIC4.17□□□□□ -1.74
SLC44A1Q8WWI5 RNU6-1279P-201ENST00000383917 103 ntBASIC4.17□□□□□ -1.74
SLC44A1Q8WWI5 U3.22-201ENST00000391120 215 ntBASIC4.17□□□□□ -1.74
SLC44A1Q8WWI5 AL139098.1-201ENST00000407291 389 ntBASIC4.17□□□□□ -1.74
SLC44A1Q8WWI5 MRPS36P1-201ENST00000421291 307 ntBASIC4.17□□□□□ -1.74
SLC44A1Q8WWI5 GTF2IP23-201ENST00000423746 351 ntBASIC4.17□□□□□ -1.74
SLC44A1Q8WWI5 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.17□□□□□ -1.74
SLC44A1Q8WWI5 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SLC44A1Q8WWI5 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.17□□□□□ -1.74
SLC44A1Q8WWI5 AC004865.1-201ENST00000442276 1003 ntBASIC4.17□□□□□ -1.74
SLC44A1Q8WWI5 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.17□□□□□ -1.74
SLC44A1Q8WWI5 MTCO2P25-201ENST00000447065 681 ntBASIC4.17□□□□□ -1.74
SLC44A1Q8WWI5 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.17□□□□□ -1.74
SLC44A1Q8WWI5 RFC5P1-201ENST00000454419 874 ntBASIC4.17□□□□□ -1.74
SLC44A1Q8WWI5 RPL36AP13-201ENST00000457490 317 ntBASIC4.17□□□□□ -1.74
SLC44A1Q8WWI5 RN7SL98P-201ENST00000462271 300 ntBASIC4.17□□□□□ -1.74
SLC44A1Q8WWI5 AC010683.1-201ENST00000473673 378 ntBASIC4.17□□□□□ -1.74
SLC44A1Q8WWI5 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.17□□□□□ -1.74
SLC44A1Q8WWI5 AC108734.3-201ENST00000481241 1165 ntBASIC4.17□□□□□ -1.74
SLC44A1Q8WWI5 AP000563.1-201ENST00000490865 758 ntBASIC4.17□□□□□ -1.74
SLC44A1Q8WWI5 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.17□□□□□ -1.74
SLC44A1Q8WWI5 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.17□□□□□ -1.74
SLC44A1Q8WWI5 AC109458.1-201ENST00000508858 316 ntBASIC4.17□□□□□ -1.74
SLC44A1Q8WWI5 FABP5P12-201ENST00000515543 389 ntBASIC4.17□□□□□ -1.74
SLC44A1Q8WWI5 SNORA3.4-201ENST00000515969 96 ntBASIC4.17□□□□□ -1.74
SLC44A1Q8WWI5 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC4.17□□□□□ -1.74
SLC44A1Q8WWI5 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.17□□□□□ -1.74
SLC44A1Q8WWI5 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC4.17□□□□□ -1.74
SLC44A1Q8WWI5 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SLC44A1Q8WWI5 AC010198.2-201ENST00000550612 259 ntBASIC4.17□□□□□ -1.74
SLC44A1Q8WWI5 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.17□□□□□ -1.74
SLC44A1Q8WWI5 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.17□□□□□ -1.74
SLC44A1Q8WWI5 AL354943.1-201ENST00000572103 781 ntBASIC4.17□□□□□ -1.74
SLC44A1Q8WWI5 NF1P5-201ENST00000588287 448 ntBASIC4.17□□□□□ -1.74
SLC44A1Q8WWI5 DUXAP3-201ENST00000603616 594 ntBASIC4.17□□□□□ -1.74
SLC44A1Q8WWI5 AC019193.2-201ENST00000610012 634 ntBASIC4.17□□□□□ -1.74
SLC44A1Q8WWI5 MIR6758-201ENST00000620653 63 ntBASIC4.17□□□□□ -1.74
SLC44A1Q8WWI5 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SLC44A1Q8WWI5 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SLC44A1Q8WWI5 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SLC44A1Q8WWI5 ERCC6-202ENST00000374127 1782 ntBASIC4.17□□□□□ -1.74
SLC44A1Q8WWI5 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
SLC44A1Q8WWI5 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SLC44A1Q8WWI5 AC139713.2-214ENST00000642059 1811 ntBASIC4.16□□□□□ -1.74
SLC44A1Q8WWI5 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.16□□□□□ -1.74
SLC44A1Q8WWI5 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SLC44A1Q8WWI5 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
SLC44A1Q8WWI5 Y_RNA.192-201ENST00000363977 102 ntBASIC4.16□□□□□ -1.74
SLC44A1Q8WWI5 CD2-201ENST00000369477 478 ntTSL 2 BASIC4.16□□□□□ -1.74
SLC44A1Q8WWI5 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.16□□□□□ -1.74
SLC44A1Q8WWI5 RNA5SP36-201ENST00000410197 133 ntBASIC4.16□□□□□ -1.74
SLC44A1Q8WWI5 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC4.16□□□□□ -1.74
SLC44A1Q8WWI5 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC4.16□□□□□ -1.74
SLC44A1Q8WWI5 AL391219.1-201ENST00000422570 483 ntBASIC4.16□□□□□ -1.74
SLC44A1Q8WWI5 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC4.16□□□□□ -1.74
SLC44A1Q8WWI5 USP9YP11-201ENST00000427537 717 ntBASIC4.16□□□□□ -1.74
SLC44A1Q8WWI5 C4BPAP2-201ENST00000428434 478 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms