Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
SYNE1Q8NF91 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC1□□□□□ -2.25
SYNE1Q8NF91 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
SYNE1Q8NF91 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC1□□□□□ -2.25
SYNE1Q8NF91 ZNF603P-201ENST00000405613 487 ntBASIC1□□□□□ -2.25
SYNE1Q8NF91 LIPT1P1-201ENST00000415870 1186 ntBASIC1□□□□□ -2.25
SYNE1Q8NF91 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC1□□□□□ -2.25
SYNE1Q8NF91 FCF1P3-201ENST00000496394 590 ntBASIC1□□□□□ -2.25
SYNE1Q8NF91 PTGES3P3-201ENST00000511479 482 ntBASIC1□□□□□ -2.25
SYNE1Q8NF91 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC1□□□□□ -2.25
SYNE1Q8NF91 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC1□□□□□ -2.25
SYNE1Q8NF91 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC1□□□□□ -2.25
SYNE1Q8NF91 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC1□□□□□ -2.25
SYNE1Q8NF91 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC1□□□□□ -2.25
SYNE1Q8NF91 MTND6P33-201ENST00000571794 183 ntBASIC1□□□□□ -2.25
SYNE1Q8NF91 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC1□□□□□ -2.25
SYNE1Q8NF91 AL162274.2-201ENST00000614406 332 ntBASIC1□□□□□ -2.25
SYNE1Q8NF91 MTND4P10-201ENST00000446199 1363 ntBASIC1□□□□□ -2.25
SYNE1Q8NF91 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
SYNE1Q8NF91 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC1□□□□□ -2.25
SYNE1Q8NF91 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
SYNE1Q8NF91 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC1□□□□□ -2.25
SYNE1Q8NF91 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1□□□□□ -2.25
SYNE1Q8NF91 GNG5P1-201ENST00000255500 204 ntBASIC1□□□□□ -2.25
SYNE1Q8NF91 HMGB3P20-201ENST00000417997 600 ntBASIC1□□□□□ -2.25
SYNE1Q8NF91 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC1□□□□□ -2.25
SYNE1Q8NF91 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC1□□□□□ -2.25
SYNE1Q8NF91 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC1□□□□□ -2.25
SYNE1Q8NF91 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC1□□□□□ -2.25
SYNE1Q8NF91 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC1□□□□□ -2.25
SYNE1Q8NF91 MIR4644-201ENST00000579929 84 ntBASIC1□□□□□ -2.25
SYNE1Q8NF91 MIR4425-201ENST00000580572 84 ntBASIC1□□□□□ -2.25
SYNE1Q8NF91 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC1□□□□□ -2.25
SYNE1Q8NF91 AC092079.1-201ENST00000558620 1985 ntBASIC1□□□□□ -2.25
SYNE1Q8NF91 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC1□□□□□ -2.25
SYNE1Q8NF91 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC1□□□□□ -2.25
SYNE1Q8NF91 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC1□□□□□ -2.25
SYNE1Q8NF91 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC1□□□□□ -2.25
SYNE1Q8NF91 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC1□□□□□ -2.25
SYNE1Q8NF91 MTHFD2P4-201ENST00000515074 1025 ntBASIC1□□□□□ -2.25
SYNE1Q8NF91 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC1□□□□□ -2.25
SYNE1Q8NF91 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC1□□□□□ -2.25
SYNE1Q8NF91 GMCL1P2-201ENST00000605230 823 ntBASIC1□□□□□ -2.25
SYNE1Q8NF91 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC1□□□□□ -2.25
SYNE1Q8NF91 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC1□□□□□ -2.25
SYNE1Q8NF91 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC1□□□□□ -2.25
SYNE1Q8NF91 RNA5SP50-201ENST00000363731 107 ntBASIC1□□□□□ -2.25
SYNE1Q8NF91 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC1□□□□□ -2.25
SYNE1Q8NF91 AL034379.1-201ENST00000423216 253 ntBASIC1□□□□□ -2.25
SYNE1Q8NF91 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC1□□□□□ -2.25
SYNE1Q8NF91 SLC31A1P1-201ENST00000451221 567 ntBASIC1□□□□□ -2.25
SYNE1Q8NF91 CYCSP35-201ENST00000451978 304 ntBASIC1□□□□□ -2.25
SYNE1Q8NF91 KCTD9P6-201ENST00000522306 950 ntBASIC1□□□□□ -2.25
SYNE1Q8NF91 AP000859.1-201ENST00000525536 307 ntBASIC1□□□□□ -2.25
SYNE1Q8NF91 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC1□□□□□ -2.25
SYNE1Q8NF91 AC018552.3-201ENST00000567416 561 ntBASIC1□□□□□ -2.25
SYNE1Q8NF91 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC1□□□□□ -2.25
SYNE1Q8NF91 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC1□□□□□ -2.25
SYNE1Q8NF91 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC1□□□□□ -2.25
SYNE1Q8NF91 ALG13-230ENST00000623189 458 ntTSL 3 BASIC1□□□□□ -2.25
SYNE1Q8NF91 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC1□□□□□ -2.25
SYNE1Q8NF91 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC1□□□□□ -2.25
SYNE1Q8NF91 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC1□□□□□ -2.25
SYNE1Q8NF91 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
SYNE1Q8NF91 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC1□□□□□ -2.25
SYNE1Q8NF91 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
SYNE1Q8NF91 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
SYNE1Q8NF91 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC1□□□□□ -2.25
SYNE1Q8NF91 Z99755.1-201ENST00000414048 380 ntBASIC1□□□□□ -2.25
SYNE1Q8NF91 RAC1P3-201ENST00000416129 580 ntBASIC1□□□□□ -2.25
SYNE1Q8NF91 MTND6P18-201ENST00000439477 513 ntBASIC1□□□□□ -2.25
SYNE1Q8NF91 AC097262.1-201ENST00000452559 548 ntBASIC1□□□□□ -2.25
SYNE1Q8NF91 AC010401.1-201ENST00000463867 348 ntBASIC1□□□□□ -2.25
SYNE1Q8NF91 AC097462.2-201ENST00000504623 481 ntBASIC1□□□□□ -2.25
SYNE1Q8NF91 AC091826.1-201ENST00000514065 313 ntBASIC1□□□□□ -2.25
SYNE1Q8NF91 MIR2114-201ENST00000516645 80 ntBASIC1□□□□□ -2.25
SYNE1Q8NF91 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC1□□□□□ -2.25
SYNE1Q8NF91 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC1□□□□□ -2.25
SYNE1Q8NF91 HIGD1AP1-201ENST00000550979 275 ntBASIC1□□□□□ -2.25
SYNE1Q8NF91 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC1□□□□□ -2.25
SYNE1Q8NF91 AC093732.2-201ENST00000607950 274 ntBASIC1□□□□□ -2.25
SYNE1Q8NF91 AC022960.2-201ENST00000616300 666 ntBASIC1□□□□□ -2.25
SYNE1Q8NF91 AC139713.2-210ENST00000641741 992 ntBASIC1□□□□□ -2.25
SYNE1Q8NF91 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC1□□□□□ -2.25
SYNE1Q8NF91 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
SYNE1Q8NF91 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
SYNE1Q8NF91 RSL24D1P1-201ENST00000404972 493 ntBASIC0.99□□□□□ -2.25
SYNE1Q8NF91 MIR1287-201ENST00000408492 90 ntBASIC0.99□□□□□ -2.25
SYNE1Q8NF91 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC0.99□□□□□ -2.25
SYNE1Q8NF91 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC0.99□□□□□ -2.25
SYNE1Q8NF91 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC0.99□□□□□ -2.25
SYNE1Q8NF91 EIF2S2P4-201ENST00000461070 984 ntBASIC0.99□□□□□ -2.25
SYNE1Q8NF91 AC087312.1-201ENST00000471411 480 ntBASIC0.99□□□□□ -2.25
SYNE1Q8NF91 RN7SL432P-201ENST00000484057 298 ntBASIC0.99□□□□□ -2.25
SYNE1Q8NF91 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC0.99□□□□□ -2.25
SYNE1Q8NF91 USP9YP5-201ENST00000511770 630 ntBASIC0.99□□□□□ -2.25
SYNE1Q8NF91 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC0.99□□□□□ -2.25
SYNE1Q8NF91 MTND5P24-201ENST00000438892 1767 ntBASIC0.99□□□□□ -2.25
SYNE1Q8NF91 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
SYNE1Q8NF91 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms